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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_002601.2 RefSeqGene
- Range
-
106932..188562
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001072.4 → NP_001063.2 UDP-glucuronosyltransferase 1-6 isoform 1 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript. Its first exon contains both the 5' UTR and the 5' coding sequence, as is typical of the UGT1A genes.
- Source sequence(s)
-
AY435141, BE463503, DB014621
- Consensus CDS
-
CCDS2507.1
- UniProtKB/Swiss-Prot
- A6NKK6, B8K289, P19224, Q96TE7
- UniProtKB/TrEMBL
- Q5DSZ8, Q8WUQ4
- Related
- ENSP00000303174.6, ENST00000305139.11
- Conserved Domains (2) summary
-
- PHA03392
Location:15 → 506
- egt; ecdysteroid UDP-glucosyltransferase; Provisional
- pfam00201
Location:27 → 523
- UDPGT; UDP-glucoronosyl and UDP-glucosyl transferase
-
NM_205862.3 → NP_995584.1 UDP-glucuronosyltransferase 1-6 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) includes an alternate exon and uses an alternate splice site in the unique 5' end, compared to variant 1. Variant 2 differs from the typical structure of a UGT1A transcript in that its first exon is entirely UTR while the coding sequence begins in the second exon. Variant 2 uses a downstream in-frame start codon compared to variant 1, resulting in isoform 2 which has a shorter N-terminus than isoform 1.
- Source sequence(s)
-
AC006985, AC114812
- Consensus CDS
-
CCDS2508.1
- UniProtKB/TrEMBL
-
Q5DT01
- Related
- ENSP00000362523.1, ENST00000373424.5
- Conserved Domains (2) summary
-
- PHA03392
Location:2 → 239
- egt; ecdysteroid UDP-glucosyltransferase; Provisional
- pfam00201
Location:1 → 256
- UDPGT; UDP-glucoronosyl and UDP-glucosyl transferase
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000002.12 Reference GRCh38.p14 Primary Assembly
- Range
-
233691702..233773300
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060926.1 Alternate T2T-CHM13v2.0
- Range
-
234180351..234261929
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)