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    KATNBL1P6 katanin regulatory subunit B1 like 1 pseudogene 6 [ Homo sapiens (human) ]

    Gene ID: 729176, updated on 10-Dec-2024

    Summary

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    Official Symbol
    KATNBL1P6provided by HGNC
    Official Full Name
    katanin regulatory subunit B1 like 1 pseudogene 6provided by HGNC
    Primary source
    HGNC:HGNC:49056
    See related
    AllianceGenome:HGNC:49056
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See KATNBL1P6 in Genome Data Viewer
    Location:
    6q24.3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (146801669..146803824, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (147994895..147997050, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (147122805..147124960, complement)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901517 Neighboring gene androglobin Neighboring gene uncharacterized LOC105378040 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr6:147150949-147151716 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25232 Neighboring gene STXBP5 antisense RNA 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17645 Neighboring gene Sharpr-MPRA regulatory region 4352 Neighboring gene Sharpr-MPRA regulatory region 12413 Neighboring gene Sharpr-MPRA regulatory region 4624 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr6:147365163-147366362 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:147374300-147374964 Neighboring gene uncharacterized LOC124901422 Neighboring gene lung adenocarcinoma associated transcript 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Markers

    Other Names

    • katanin p80 subunit B-like 1 pseudogene 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_003954.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL138916, BC067801

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      146801669..146803824 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      147994895..147997050 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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