Use GEO2R to compare two or more groups of Samples in order to identify genes that are differentially expressed across experimental conditions. Results are presented as a table of genes ordered by significance. Full instructions Tutorial video

GEO accession
Set
RNA-seq Series analysis ? BETA

Quick start

  • Specify a GEO Series accession and a Platform if prompted.
  • Click 'Define groups' and enter names for the groups of Samples you plan to compare, e.g., test and control.
  • Assign Samples to each group. Highlight Sample rows then click the group name to assign those Samples to the group. Use the Sample metadata (title, source and characteristics) columns to help determine which Samples belong to which group.
  • Click 'Analyze' to perform the calculation with default settings.
  • You may change settings in the Options tab.

How to use

Analyze
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