GEO help: Mouse over screen elements for information.
Status
Public on Apr 15, 2010
Title
Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Feature Number version)
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
Human 44k Content Refresh
Submission date
Apr 15, 2010
Last update date
Jun 30, 2017
Organization
Agilent Technologies
E-mail(s)
[email protected] Phone
877-424-4536
URL
http://www.agilent.com Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (2292)
GSM610388 , GSM610392 , GSM610393 , GSM610394 , GSM610395 , GSM610396
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GSM1208947 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here Series (192)
GSE24782 Identification of target genes of tumor suppressor microRNAs in human cancer
GSE26032 Identification of target genes of cancer-related microRNAs in human cancer
GSE29213 Gene regulation by phosphomimetic Myc (MycD), cytosine arabinoside (AraC) and retinoic acid (RA)
GSE29921 Global mRNA expression profiling of HCT116 cells overexpressing miR30a-5p
GSE31094 Overexpression of Cbx4 wild type and of a Cbx4 sumoylation mutant in human epidermal stem cells
GSE31147 Knockdown and Overexpression of Cbx4 wild type, Cbx4 chromodomain mutant, and Cbx4 sumoylation mutant in human epidermal stem cells
GSE31277 MicroRNA expression profile in Head and Neck Cancer: HOX-cluster embedded microRNA-196 and microRNA-10b dysregulation is implicated in cell proliferation
GSE32886 Hepatitis C virus-induced expression profiling of Hepatic and non-hepatic cancer cell lines [mock-treated]
GSE33487 Chemokine expressions in breast cancer patients
GSE36592 RNAi-mediated silencing of MLL-AF9 reveals leukemia-associated downstream targets and processes
GSE37119 Identification of target genes of cancer-related microRNAs in human cancer
GSE37380 Stable and inducible expression of Fbxo25 in Flp-In-293 cells: control vs. tetracycline treatment
GSE37395 Transcriptional regulation of Sox17 in HUVEC
GSE39008 Bone Marrow Endothelial Cell Progenitor Cell Irradiation Study
GSE39019 HUVEC T Cell Irradiation Study
GSE39020 Bone Marrow Endothelial Cell Progenitor Cell and HUVEC T Cell Irradiation Studies
GSE39488 Gene expression changes in venous segments of overflowing arteriovenous fistulae
GSE39704 Identification of ZIC2 target genes in human pancreatic cancer cell lines PANC-1 and KP-4
GSE39741 Mepazine inhibitor effects DLBCL cell line HBL1
GSE40492 Molecular Markers for Predicting Treatment Outcome in Patients with Rectal Cancer: A Comprehensive Analysis from the German Rectal Cancer Trials
GSE41156 Gene alteration in A549 cells by disinfectant PHMG
GSE41796 Influence of ATL-type Helios overexpression or WT-Helios/Ikaros knockdown on gene expression profile in Jurkat cells
GSE45613 Expression data from CD44-knockdown MDA-MB-231 human breast cancer cells.
GSE45620 Identification of hsa-miR-135a target genes in the prostate cancer cell line LNCaP
GSE45903 Identification of hsa-miR-135a target genes in LNCaP and HeLa cell lines
GSE46157 Placental gene-expression profiles of Intrahepatic cholestasis of pregnancy (ICP)
GSE46393 HOXB7 mRNA is overexpressed in pancreatic ductal adenocarcinomas and its knockdown induces cell cycle arrest and apoptosis.
GSE46721 Transcriptomic effects of miR-30d transient over-expression in human endometrial epithelial cells.
GSE47371 WWOX interacts with SMAD3 and modulates its transcriptional activity in breast cells
GSE49051 Gene expression outcome for gastric cancer patients
GSE49052 TMEFF2 treated cancer cells and gastric cancer
GSE49887 Small Cell Carcinoma of the Ovary (SCCO) vs. Normal Ovary
GSE49888 Ovarian Cancer: 19 ovarian tumors of diverse histologic type vs. pool of all 19 tumors.
GSE50631 Human epidermal stem cell function is regulated by circadian oscillations
GSE50850 Epithelial Ovarian Cancer Cells: Control vs. miR-506 Transfected
GSE52851 Follicular cells in vivo and developmental competence of oocytes in human
GSE54108 A cDNA microarray analysis was performed on shRNA KDs of EZH2, SUZ12, BMI1, or CBX8 HepG2 cells.
GSE54325 Impact of monomeric and oligomeric flavanols (MOF) consumption on the gene expression profile of leukocytes (human)
GSE54385 A comparison of gene expression between human dermal fibroblasts and neurons infected by varicella zoster virus
GSE54690 Transcriptome-Methylome study of blood samples from flavanol diet intervention Paper title: Dietary flavanols modulate the transcription of genes associated with cardiovascular pathology and induces complex changes of their DNA methylation state.
GSE54953 MiRNome and transcriptome aided pathway analysis in human regulatory T cells
GSE55851 Whole genome gene expression profiling in CD4+ T-cells, FACS-sorted based on CADM1/CD7 expression levels, in Adult T-cell Leukemia-lymphoma (ATL) patients, HTLV-1 carriers, and in healthy volunteers.
GSE56432 Global genetic impact of surface-modified gold nanoparticles on two model human cell lines
GSE57565 Genome-wide gene expression analysis of MNT-1 cell under hyperosmotic condition
GSE58287 Transcriptional Profiling of the Immune Response to Marburg Infection
GSE58473 A Novel Human Gastric Primary Cell Culture System for Modeling Helicobacter Pylori Infection In Vitro
GSE58625 Transcriptomic signatures in whole blood of patients who suffer a Chronic Inflammatory Response Syndrome (CIRS) as a result of exposure to the marine toxin ciguatoxin
GSE59145 MYC-ER and MYC-ER V394D induced gene expression changes in MCF10A cells
GSE59147 Analysis of MYC and MIZ1 binding and MIZ1-dependent gene expression changes in MCF10A cells
GSE59642 Gene expression profiling in synovial fluid derived stem cells (SFSCs)
GSE60914 Central Role of Th2 and Tc2 Lymphocytes in Multiple Sclerosis Pattern II Demyelinating Lesions
GSE60921 mRNA expression signatures of human glioblastoma stem cell like cells after treatment with FG-3019, irradiation and FG-3019 + irradiation
GSE60943 Multiple Sclerosis Pattern II Demyelinating Lesions
GSE61088 The G1 arrest and maintenance mechanism between the long-term G1-arrested and the G1-arrested cells.
GSE61110 Identification of genes responsible for DNA damage induced senescence
GSE62281 Wnt5A signaling in human coronary artery endothelial cells
GSE63533 Transcriptome profiling of HeLa-S3 cells treated with siRNAs targeting LATS1 and/or LATS2
GSE63538 LATS2 regulates repressive epigenetic integrity via regulation of Polycomb repressive complex 2
GSE63806 Dose dependent toxicological response of lung cells exposed to silica nanoparticles
GSE64272 Impacts of reprogramming method and culture conditions in trophoblast differentiation of induced pluripotent stem cells
GSE64539 Ovarian cancer cell line RMG1: ALDEFLUOR positive vs. negative
GSE64611 Insulin-like growth factor-binding protein 2 Induces Epithelial-mesenchymal Transition via Activation of NF-κB Pathway in Pancreatic Ductal Adenocarcinoma
GSE64837 Global mRNA expression profiling of patient derived pancreatic carcinoma xenograft Bo63 following JQ1-SAHA combination therapy
GSE64860 IL-4 signaling in human coronary artery endothelial cells
GSE65499 CaSki cells: adherent cultured cell vs. sphere cells
GSE66283 Different target specificities of haptoglobin and hemopexin define their sequential role as primary and backup protective systems against hemoglobin toxicity
GSE66656 HeLa cell: DUSP2 overexpression vs. control
GSE66684 UM-UC cell: ALDH(+) vs ALDH(-)
GSE67420 Human HL-60 Cells: all-trans retinoic acid (ATRA) vs. ATRA plus arsenic trioxide (ATO)
GSE68026 Expression data from MCF-7 breast cancer cells treated with Plumbagin (PL) and its derivative Acetyl Plumbagin (AP)
GSE68679 Gene expressions in K67-treated or non-treated Huh1 cells
GSE69326 Analysis of gene expression changes in KPT-185-treated HMLE cells transduced to stably overexpress SNAI1
GSE69406 Exome sequencing identifies somatic mutations of DDX3X in natural killer/T-cell lymphoma
GSE70490 MiR-511 dependently expressed genes in monoblastic cell line THP1
GSE70781 Hepatitis C virus-induced expression profiling of Hepatic and non-hepatic cancer cell lines
GSE71515 Genome-wide Immune Modulation of TLR3-mediated Inflammation in Intestinal Epithelial Cells Differ between Single versus Multi-Strain Probiotic Combination
GSE71786 Human glioma cells: chronophin (CIN/PDXP) knockdown vs. control or rescue
GSE72304 Remodeling of major genomic fabrics and their interplay in metastatic clear cell renal carcinoma
GSE72333 Remodeling of major genomic fabrics and their interplay in Capridine-treated DU145 classic human prostate cancer
GSE72414 Remodeling of DNA transcription genomic fabric in Capridine-treated LNCaP human prostate cancer cell line
GSE72415 Transcriptomic effects of Capridine on the acute promyelocytic leukemia HL-60 cell line
GSE72585 Propionibacterium acnes inhibits FOXM1 (Forkhead box M1) and induces cell cycle alterations in human primary prostate cells
GSE73756 Gene expression analysis between CD20- CD138- and CD20+ CD138+ subpopulations using sorted MWCL-1
GSE74743 Development of MeTA-inducible system in LNCaP cells
GSE74744 Development of DNA demethylation technology in HEK293T cells
GSE74842 Reduced mTORC1 activity is associated with responsiveness to MEK inhibition (PD0325901) in gastric cancer cells.
GSE76589 Interfering with interferons: cholesterol modification by Helicobacter pylori prevents IFN receptor assembly
GSE77149 Human colorectal cancer cell line CRC#21: ALDH-high cells vs. ALDH-low cells
GSE77150 Human colorectal cancer cell line CRC#21: Sphere-cultured cells vs. Adherent-cultured cells
GSE77719 IL-17A plays a central role in the expression of psoriasis signature genes through induction of IkappaB-zeta in keratinocytes
GSE79118 Ionomycin Treatment Renders NK cells Hyporesponsive
GSE79534 The genes regulated by JAK2 and Lnc-BM in breast cancer brain metastasis cells (231-BM, derived from MDA-MB-231 cells) treated with Oncostatin M (OSM)
GSE79808 Acetylation enhances TET2 function in protecting against abnormal DNA methylation during oxidative stress [gene expression]
GSE81064 MCF7 cells: empty vector (Neo) vs. PAR4 overexpression vector transfected before and after 100nM docetaxel treatment
GSE81394 Near-tetraploid cells exhibit chromosome instability triggered by replication stress and enhanced invasive capabilities [expression]
GSE81395 Near-tetraploid cells exhibit chromosome instability triggered by replication stress and enhanced invasive capabilities
GSE81428 Acetylation enhances TET2 function in protecting against abnormal DNA methylation during oxidative stress
GSE83634 Inhibition of NF-κB signaling by a novel siRNA sequence induces apoptosis and suppresses tumor growth in KRAS mutant colorectal cancer.
GSE84541 Trancriptomic analysis of PKA and PKC signalling gene cascade in cultured human ovarian granulosa cells (KGN) [FSK treatments]
GSE84542 Trancriptomic analysis of PKA and PKC signalling gene cascade in cultured human ovarian granulosa cells (KGN) [PMA treatments]
GSE84543 Trancriptomic analysis of PKA and PKC signalling gene cascade in cultured human ovarian granulosa cells (KGN)
GSE86963 Decreased DEPTOR expression is involved in enhanced cell motility and invasion capability of ASS1 (Argininosuccinate synthetase 1) -KO cells
GSE87545 Transcriptomic signatures in follicular cells associated with failure of in vitro fertilization in humans
GSE88792 Glycosyltransferase enzyme GCNT3 overexpression effect on SW620 colon cancer cells
GSE91070 DNA methylation patterns separate senescence from malignant transformation potential in human cells [gene expression]
GSE91071 DNA methylation patterns separate senescence from malignant transformation potential in human cells
GSE92899 Distinct Sets Of Genes Representing Overlapping Biological Functions Are Altered By Intrinsic Properties Of Carbon Nanomaterials In Vitro And In Vivo [human]
GSE92901 Distinct Sets Of Genes Representing Overlapping Biological Functions Are Altered By Intrinsic Properties Of Carbon Nanomaterials In Vitro And In Vivo
GSE93661 Torn supraspinatus muscle vs. intact subscapularis muscle in rotator cuff tears patients
GSE94635 Late cornified envelope 1C (LCE1C) gene is a transcriptional target of TAp63.
GSE94830 RNase 7 downregulates TH2 cytokine production by activated human T-cells
GSE95624 Molecular biomarkers for weight control in obese individuals subjected to a multi-phase dietary intervention
GSE97001 Hierarchal gene master regulators of one case of papillary thyroid cancer
GSE97002 Hierarchal gene master regulators of papillary (BCPAP) and anaplastic (8505C) thyroid cancer cell lines
GSE97028 Validation of the Personalized Gene Therapy by stably transfection of DDX19B in the papillary (BCPAP) and anaplastic (8505C) thyroid cancer cell lines
GSE97030 Validation of the Personalized Gene Therapy by stably transfection of PANK2 in the papillary (BCPAP) and anaplastic (8505C) thyroid cancer cell lines
GSE97031 Validation of the Personalized Gene Therapy by stably transfection of NEMP1 (TMEM194A) in the papillary (BCPAP) and anaplastic (8505C) thyroid cancer cell lines
GSE97427 Validation of the Personalized Gene Therapy by stably transfection of UBALD1 in the papillary (BCPAP) and anaplastic (8505C) thyroid cancer cell lines
GSE97482 Gene Expression profiling in luminal breast cancer cells treated with a novel KDM5 inhibitor, 5-aza-2' Deoxycytidine, or both.
GSE97484 Breast cancer cells treated with a novel KDM5 inhibitor, 5-aza-2' Deoxycytidine, or both.
GSE98630 Transcriptional profiling of THP-1 cells on treatment with LL-37 and nano conjugated LL-37
GSE98931 Triple Negative Breast tumors: SPARC Positive Tumors vs SPARC Negative Tumors
GSE100703 Adenylosuccinate lyase (ADSL) enhances endometrial cancer aggressiveness via increasing killer cell lectin like receptor C3 expression by fumarate
GSE101862 Genes expression in xenografts obtained from 15 months cigarette smoke condensate (CSC)-exposed HBEC cells following expression of KRASV12
GSE101863 Gene Expression of HBEC-3KT cells exposed to cigarette smoke condensate (CSC) over a period of 15 months
GSE101864 Chronic Cigarette Smoke-Induced Epigenomic, gene expression and chromatin changes in Bronchial Epithelial Cells
GSE102971 Developing human radiation biodosimetry models: Testing cross-species conversion approaches using an ex vivo model system
GSE103522 RNase 7 strongly promotes TLR9-mediated DNA sensing by human plasmacytoid dendritic cells
GSE104661 NFAT3-regulated genes in human aortic smooth muscle cells (ASMC)
GSE104813 Gene expression signatures for combined ATO and CDDP treatment (Ato-C) in CML cell lines
GSE106401 Gene expression signatures for conophylline (CNP) treatment in human foreskin fibroblasts NB1RGB cells
GSE107712 Chronic Chlamydia infection in fallopian tube organoids alters epithelial differentiation and accelerate methylation changes
GSE109665 RIP-Chip analysis supports different roles for AGO2 and GW182 proteins in recruiting and processing microRNA targets (mRNA)
GSE109667 RIP-Chip analysis supports different roles for AGO2 and GW182 proteins in recruiting and processing microRNA targets
GSE115558 Gene expression signatures for human interleukin-6 (IL-6) treatment in human multiple myeloma (MM) cell lines.
GSE115676 EWS-FLI1 modulated alternative splicing of ARID1A reveals novel oncogenic function through the BAF complex
GSE116000 Establishment and characterization of CRISPR/Cas9-mediated Merlin/NF2 knockout human mesothelial cell line Met-5A
GSE116361 Hierarchal gene master regulators of adenocarcinomic human alveolar basal epithelial cells A549.
GSE116575 Overexpression of miR-155 alters the hierarchy of gene master regulators in the adenocarcinomic human alveolar basal epithelial cell line A549
GSE116727 Establishment and characterization of CRISPR/Cas9-mediated insertion of FLT3 ITD K562 cell line: Molecular insight of CD52 in leukemia
GSE118297 IL1b signaling in human coronary artery endothelial cells
GSE118971 Defining UHRF1 Domains That Support Maintenance of Human Colon Cancer DNA Methylation and Oncogenic Properties [expression]
GSE118972 Defining UHRF1 Domains That Support Maintenance of Human Colon Cancer DNA Methylation and Oncogenic Properties
GSE119003 AXL is a putative tumor suppressor and dormancy regulator in prostate cancer
GSE120133 PIM1 and NFATC1 targets in PC-3 prostate cancer cells
GSE120291 The expression levels of genes on trisomic chromosomes (chromosome 13, 18 or 21) are increased approximately 1.5-fold on average compared with diploid cells
GSE121378 Effects of combined tamoxifen and short-term starvation on the gene expression profile of hormone receptor-positive breast cancer cells
GSE125883 Preservation of stemness in high-grade serous ovarian cancer organoids requires low Wnt environment
GSE127786 FLANC, a novel primate-specific long non-coding RNA, is involved in colorectal carcinogenesis and holds potential as a novel therapeutic target (overexpression)
GSE133891 Gene Commanding Height (GCH) hierarchy in the cancer nucleus and cancer-free resection margins from a surgically removed prostatic adenocarcinoma of a 47y old white man
GSE133906 Gene Commanding Height (GCH) hierarchy in the cancer nucleus and cancer-free resection margins from a surgically removed prostatic adenocarcinoma of a 65y old black man
GSE135736 Development of LHX6-inducible system in PK-1 and PK-9 cells
GSE135784 Establishment and characterization of NF2/CDKN2A-double knockout gene in human mesothelial cell line generated by using CRISPR/Cas9 technology
GSE137916 The role of CRYBB2 in breast cancer
GSE138479 Trancriptome profiling of human OCI-AML3 AML cell line stably transfected by pMEP4-Empty or pMEP4-RhoH plasmids, respectively.
GSE140867 Effects of glucose exposures on gene expressions in HepG2 cells
GSE140973 Secondary Resistance to Anti-EGFR Therapy by Transcriptional Reprogramming in Patient-Derived Colorectal Cancer Models
GSE141246 Construction of IRX4-inducible system in pancreatic cancer cell lines, PK-1 and PK-9
GSE142283 Construction of PYCARD-inducible system in two cancer cell lines, LNCaP (prostate cancer) and DLD1 (colorectal cancer)
GSE145091 Lactobacilli secretome-mediated negative regulator induction in HT-29 human IEC
GSE145987 Transcriptome profiling of Wnt5A activated human coronary artery endothelial cells
GSE146691 Proinflammatory signaling mediated by the combined action of IL-1/Wnt5A in human coronary artery endothelial cells
GSE148770 T-cells' gene expression after high-dose melphalan
GSE150031 HEK-293 cells: Control cells transfected with hRIZ2 and rRIZ1
GSE153514 Global Gene Expression Characterization of Circulating Tumor Cells in Metastatic Castration-Resistant Prostate Cancer Patients
GSE154245 Oral primo-colonizing bacteria modulate inflammation and gene expression in bronchial epithelial cells
GSE155731 Gene expression by LASP1 knocked down in PC3 cells
GSE155867 Effect of empagliflocin on basal and IL1-ß-mediated gene expression in human proximal tubular cells
GSE168718 Genomic Fabric Remodeling in Prostate Cancer
GSE169683 Inhibitory effect of empagliflocin on IL1-β-mediated gene expression in human proximal tubular cells
GSE172103 TNFα-producing Macrophages Determine Subtype Identity and Prognosis via AP1 Enhancer Reprogramming in Pancreatic Cancer
GSE173757 Triple-negative breast cancer cell line MDA-MB-231 +/- CD43 knockdown
GSE179674 Genome wide gene expression profiling of pre and post treatment breast cancer biopsy
GSE183889 Transcriptomic heterogeneity of the prostate cancer
GSE193798 Gene expression signatures for apigenin treatment in human AML cell lines
GSE202084 Human Peripheral Blood mononuclear cells from postmenopausal women: grapefruit juice vs. flavanone-free placebo
GSE202163 PI3Kβ and β-Catenin mediate EZH2 removal from promoters controlling human ESC stemness and primitive streak gene expression
GSE210348 Human Chronic Lymphocytic Leukaemia cells: Untreated vs mithramycin-treated
GSE216255 Inhibition of MLCK-mediated migration and invasion in human endometriosis stromal cells by NF-kB inhibitor DHMEQ
GSE216590 Transcriptomic analysis of HepG2 cells treated with BDE-47, BDE-99, BDE-209 and their ternary mixture at 1nM as a dietary relevant concentration
GSE221948 Transcriptomic data of Bevacizumab-adapted colorectal adenocarcinoma cells HCT116
GSE222411 Gene expression changes between lenalidomide (LEN)-sensitive and LEN-resistant human multiple myeloma (MM) cell lines
GSE222629 Gene expression signatures in EGFR-deleted oral squamous cell carcinoma (OSCC) cell lines
GSE225273 Transcriptional profiling of THP-1 monocytes conditioned with Lacticaseibacilli rhamnosus R0011 secretome
GSE225320 Gene expression profiling of human fresh and cryopreserved sperm
GSE230665 Genes expression profiles of postmenopausal osteoporosis
GSE232913 Development of gene expression signatures for high glucose-induced renal tubular fibrosis
GSE236078 Lasting response by vertical inhibition with Cetuximab and Trametinib in KRAS mutated Colorectal Cancer Patient-derived Xenografts (PDX)
GSE249102 Whole RNA profiling of Tuberculosis-diabetes comorbidity linked to diabetes with poor glycemic control
GSE253526 Effects of knockdown or overexpression of PNPLA6 in human retinal pigment epithelial cell line ARPE-19
GSE255187 Oncopig and Human Bladder Cancer Cell Lines: Control vs Gemcitabine Treated
GSE273716 Effect of Lhx2 in K562 cells
Relations Alternative to
GPL13497
Data table header descriptions ID Agilent feature number
COL Column
ROW Row
NAME NAME
SPOT_ID Spot identifier
CONTROL_TYPE Control type
REFSEQ RefSeqAccession
GB_ACC GenBankAccession
GENE Entrez Gene ID
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
UNIGENE_ID UnigeneID
ENSEMBL_ID EnsemblID
TIGR_ID TIGRID
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
CYTOBAND Cytoband
DESCRIPTION Description
GO_ID GoIDs
SEQUENCE Sequence
Data table ID COL ROW NAME SPOT_ID CONTROL_TYPE REFSEQ GB_ACC GENE GENE_SYMBOL GENE_NAME UNIGENE_ID ENSEMBL_ID TIGR_ID ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND DESCRIPTION GO_ID SEQUENCE 1
266
170
GE_BrightCorner
GE_BrightCorner
pos
2
266
168
DarkCorner
DarkCorner
pos
3
266
166
DarkCorner
DarkCorner
pos
4
266
164
DarkCorner
DarkCorner
pos
5
266
162
DarkCorner
DarkCorner
pos
6
266
160
DarkCorner
DarkCorner
pos
7
266
158
DarkCorner
DarkCorner
pos
8
266
156
DarkCorner
DarkCorner
pos
9
266
154
DarkCorner
DarkCorner
pos
10
266
152
DarkCorner
DarkCorner
pos
11
266
150
DarkCorner
DarkCorner
pos
12
266
148
A_23_P146146
A_23_P146146
FALSE
NM_152565
NM_152565 245972 ATP6V0D2
ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2
Hs.436360
ENST00000285393
ref|NM_152565|ens|ENST00000285393|gb|AK096027
chr8:87234421-87234480
hs|8q21.3
Homo sapiens ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2 (ATP6V0D2), mRNA [NM_152565]
GO:0005515(protein binding)|GO:0005768(endosome)|GO:0006811(ion transport)|GO:0015078(hydrogen ion transmembrane transporter activity)|GO:0015986(ATP synthesis coupled proton transport)|GO:0015992(proton transport)|GO:0016020(membrane)|GO:0016324(apical plasma membrane)|GO:0016471(vacuolar proton-transporting V-type ATPase complex)|GO:0033179(proton-transporting V-type ATPase, V0 domain)
AGTAAGCCACACTATATCTTCATGAGTTGCAAATCCATGGAAACACAGTAAACCAGCCCT
13
266
146
A_23_P42935
A_23_P42935
FALSE
NM_004333
NM_004333 673 BRAF
v-raf murine sarcoma viral oncogene homolog B1
Hs.550061
ENST00000497784
ref|NM_004333|ens|ENST00000497784|ens|ENST00000479537|ens|ENST00000288602
chr7:140080947-140080888
hs|7q34
Homo sapiens v-raf murine sarcoma viral oncogene homolog B1 (BRAF), mRNA [NM_004333]
GO:0000165(MAPKKK cascade)|GO:0000166(nucleotide binding)|GO:0004674(protein serine/threonine kinase activity)|GO:0004709(MAP kinase kinase kinase activity)|GO:0005057(receptor signaling protein activity)|GO:0005515(protein binding)|GO:0005524(ATP binding)|GO:0005634(nucleus)|GO:0005737(cytoplasm)|GO:0005886(plasma membrane)|GO:0006468(protein amino acid phosphorylation)|GO:0006916(anti-apoptosis)|GO:0007264(small GTPase mediated signal transduction)|GO:0008270(zinc ion binding)|GO:0009887(organ morphogenesis)|GO:0016740(transferase activity)|GO:0031434(mitogen-activated protein kinase kinase binding)|GO:0046872(metal ion binding)|GO:0046982(protein heterodimerization activity)|GO:0051291(protein heterooligomerization)
AGAGGATTTTAGTCTATATGCTTGTGCTTCTCCAAAAACACCCATCCAGGCAGGGGGATA
14
266
144
A_23_P117082
A_23_P117082
FALSE
NM_015987
NM_015987 50865 HEBP1
heme binding protein 1
Hs.642618
ENST00000014930
ref|NM_015987|ens|ENST00000014930|gb|CR613893|gb|AF117615
chr12:13019173-13019114
hs|12p13.1
Homo sapiens heme binding protein 1 (HEBP1), mRNA [NM_015987]
GO:0005488(binding)|GO:0005737(cytoplasm)|GO:0005739(mitochondrion)|GO:0005829(cytosol)|GO:0007623(circadian rhythm)|GO:0020037(heme binding)
AAGGGGGAAAATGTGATTTGTGCCTGATCTTTCATCTGTGATTCTTATAAGAGCTTTGTC
15
266
142
A_23_P2683
A_23_P2683
FALSE
NM_024604
NM_024604 79657 RPAP3
RNA polymerase II associated protein 3
Hs.437855
ENST00000005386
ref|NM_024604|ref|NM_001146075|ref|NM_001146076|ens|ENST00000005386
chr12:46347076-46343628
hs|12q13.11
Homo sapiens RNA polymerase II associated protein 3 (RPAP3), transcript variant 1, mRNA [NM_024604]
GO:0005488(binding)
AAGGTTTGATATGGCAGTGATGTTTATGTCAGAAACAGAGAAAAAGATTGCACGTGCATT
16
266
140
A_24_P358131
A_24_P358131
FALSE
chr2:031901856-031901795
hs|2p22.3
GCTTTCAAGGAGGAGCTGCTCATGAAGAAGAACCATGAAGAGGAAGTAAAAGGCCTACAA
17
266
138
A_33_P3367647
A_33_P3367647
FALSE
ENST00000401414
ens|ENST00000401414
chr6:139175726-139175785
hs|6q24.1
Putative guanine nucleotide exchange factor LFDH (Lung-specific F-box and DH domain-containing protein) [Source:UniProtKB/Swiss-Prot;Acc:Q008S8] [ENST00000401414]
CCTGGAACGTTCTTAATGCTTCCCATTTTCCCAGCAAAGTAAAAAACAACTTTTGTTTAA
18
266
136
A_23_P157316
A_23_P157316
FALSE
NM_178829
NM_178829 135927 C7orf34
chromosome 7 open reading frame 34
Hs.239676
ENST00000458732
ref|NM_178829|ens|ENST00000458732|ens|ENST00000297830|ens|ENST00000409607
chr7:142347895-142347954
hs|7q34
Homo sapiens chromosome 7 open reading frame 34 (C7orf34), mRNA [NM_178829]
GO:0005576(extracellular region)
GCAGAGATACCAGTTGCCATCAGTGCTAACTGACTGCCTCTCCAGGTTCGGAGTTTCATC
19
266
134
A_32_P14850
A_32_P14850
FALSE
XM_002344099
XM_002344099 Hs.448833
ENST00000429990
ens|ENST00000429990|ens|ENST00000355290|ens|ENST00000283050|ref|XM_002344099
chr16:72982937-72982996
hs|16q22.3
Nuclear pore complex-interacting protein-like 2 Precursor [Source:UniProtKB/Swiss-Prot;Acc:A6NHN6] [ENST00000429990]
AAGACACCTCCCGAATGTCTCCTTCATCCCCTTCCACCCTCAGTGGATGATAATATCAAG
20
266
132
A_23_P158596
A_23_P158596
FALSE
NM_001040196
NM_001040196 57085 AGTRAP
angiotensin II receptor-associated protein
Hs.464438
ref|NM_001040196|ref|NM_001040194|ref|NM_001040195|ref|NM_001040197
chr1:11731059-11731118
hs|1p36.22
Homo sapiens angiotensin II receptor-associated protein (AGTRAP), transcript variant 4, mRNA [NM_001040196]
GO:0005515(protein binding)|GO:0005783(endoplasmic reticulum)|GO:0005794(Golgi apparatus)|GO:0016020(membrane)|GO:0016021(integral to membrane)|GO:0031410(cytoplasmic vesicle)
TTTCTGGGTGGCTTGCTGGCCACAATCTTCCTGGACATCGTGCACATCAGCATCTTCTAC
45220 26269 Kbytes .Supplementary file Size Download File type/resource GPL10332_old_annotations.txt.gz
7.3 Mb
(ftp) (http) TXT
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