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Status
Public on Dec 21, 2010
Title
Agilent-020186 C. elegans (V2) Gene Expression Microarray (Probe Name version)
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Caenorhabditis elegans Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
Caenorhabditis elegans (Nematode) Oligo Microarray
Submission date
Dec 21, 2010
Last update date
Sep 02, 2016
Organization
Agilent Technologies
E-mail(s)
[email protected] Phone
877-424-4536
URL
http://www.agilent.com Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (217)
GSM640611 , GSM640612 , GSM640613 , GSM640614 , GSM640615 , GSM640616
GSM643915 ,
GSM643916 ,
GSM643917 ,
GSM643918 ,
GSM675861 ,
GSM675862 ,
GSM675863 ,
GSM675864 ,
GSM675865 ,
GSM675866 ,
GSM675867 ,
GSM675868 ,
GSM675869 ,
GSM675870 ,
GSM675871 ,
GSM675872 ,
GSM675873 ,
GSM675874 ,
GSM675875 ,
GSM675876 ,
GSM675877 ,
GSM675878 ,
GSM989300 ,
GSM989301 ,
GSM989302 ,
GSM989303 ,
GSM1058627 ,
GSM1058628 ,
GSM1058629 ,
GSM1058630 ,
GSM1058631 ,
GSM1058632 ,
GSM1310292 ,
GSM1310293 ,
GSM1310294 ,
GSM1310295 ,
GSM1310296 ,
GSM1310297 ,
GSM1310298 ,
GSM1310299 ,
GSM1310300 ,
GSM1310301 ,
GSM1310302 ,
GSM1310303 ,
GSM1310304 ,
GSM1310305 ,
GSM1322079 ,
GSM1322080 ,
GSM1539052 ,
GSM1539053 ,
GSM1674248 ,
GSM1674249 ,
GSM1674250 ,
GSM1674251 ,
GSM1674252 ,
GSM1674253 ,
GSM1674254 ,
GSM1674255 ,
GSM1845018 ,
GSM1845019 ,
GSM1845020 ,
GSM1845021 ,
GSM1845022 ,
GSM1845023 ,
GSM1845024 ,
GSM1845025 ,
GSM1845026 ,
GSM1845027 ,
GSM1845028 ,
GSM1845029 ,
GSM1845030 ,
GSM1845031 ,
GSM1845032 ,
GSM1890106 ,
GSM1890107 ,
GSM1890108 ,
GSM1890109 ,
GSM1890110 ,
GSM1890111 ,
GSM1890112 ,
GSM1890113 ,
GSM1890140 ,
GSM1890141 ,
GSM1890142 ,
GSM1890143 ,
GSM1890144 ,
GSM1890145 ,
GSM1890146 ,
GSM1890147 ,
GSM2157712 ,
GSM2157713 ,
GSM2157714 ,
GSM2157715 ,
GSM2157716 ,
GSM2157717 ,
GSM2157718 ,
GSM2157719 ,
GSM2157720 ,
GSM2157721 ,
GSM2157722 ,
GSM2157723 ,
GSM2157724 ,
GSM2157725 ,
GSM2157726 ,
GSM2157727 ,
GSM2157728 ,
GSM2157729 ,
GSM2157730 ,
GSM2157731 ,
GSM2300533 ,
GSM2300534 ,
GSM2300535 ,
GSM2301534 ,
GSM2301535 ,
GSM2301536 ,
GSM2301537 ,
GSM2445481 ,
GSM2445482 ,
GSM2445483 ,
GSM2445484 ,
GSM2445485 ,
GSM2445486 ,
GSM2445487 ,
GSM2445488 ,
GSM2445489 ,
GSM2445490 ,
GSM2445491 ,
GSM2445492 ,
GSM2445493 ,
GSM2445494 ,
GSM2445495 ,
GSM2445496 ,
GSM3660579 ,
GSM3660580 ,
GSM3660581 ,
GSM3660582 ,
GSM3660583 ,
GSM3660584 ,
GSM3660585 ,
GSM3660586 ,
GSM3916584 ,
GSM3916585 ,
GSM3916586 ,
GSM3916587 ,
GSM3916588 ,
GSM4278927 ,
GSM4278928 ,
GSM4278929 ,
GSM4278930 ,
GSM4775212 ,
GSM4775213 ,
GSM4775214 ,
GSM4775215 ,
GSM4775216 ,
GSM4775217 ,
GSM4775218 ,
GSM4775219 ,
GSM5284006 ,
GSM5284007 ,
GSM5284008 ,
GSM5284009 ,
GSM5284010 ,
GSM5284011 ,
GSM5284012 ,
GSM5284013 ,
GSM5284014 ,
GSM5284015 ,
GSM5284016 ,
GSM5284017 ,
GSM5284018 ,
GSM5284019 ,
GSM5284020 ,
GSM5284021 ,
GSM5284022 ,
GSM5284023 ,
GSM5284024 ,
GSM5284025 ,
GSM5284026 ,
GSM5284027 ,
GSM5284028 ,
GSM5284029 ,
GSM5284030 ,
GSM5284031 ,
GSM5284032 ,
GSM5284033 ,
GSM5284034 ,
GSM5284035 ,
GSM5284036 ,
GSM5284037 ,
GSM5284038 ,
GSM5284039 ,
GSM5284040 ,
GSM5284041 ,
GSM5284042 ,
GSM5284043 ,
GSM5284044 ,
GSM5284045 ,
GSM5284046 ,
GSM5284047 ,
GSM5284048 ,
GSM5284049 ,
GSM5284050 ,
GSM5284051 ,
GSM5284052 ,
GSM5284053 ,
GSM6429567 ,
GSM6429568 ,
GSM6832937 ,
GSM6832938 ,
GSM6832939 ,
GSM6832940 Series (25)
GSE26094 Life span-extending effects of royal jelly and its related substances on the nematode Caenorhabditis elegans
GSE26228 C. elegans pdf-1 gene knockout effect
GSE27338 Microgravity effect on C. elegans N2/VC (CERISE, 8days)
GSE40252 Gene expression profile of C. elegans worms when mekk-3 is knocked down by RNAi
GSE43207 Identification of differentially regulated genes in flcn-1 mutant C. elegans
GSE54212 C. elegans gene expression in response to Salmonella enterica infection and recovery by Tetracycline treatment
GSE54682 Caenorhabditis elegans N2: Control vs. Lysinibacillus sphaericus-fed
GSE63056 Bacillus licheniformis isolated from Korean traditional food resources enhances the lifespan of Caenorhabditis elegans through serotonin signaling
GSE68520 Genome wide expression analysis of Caenorhabditis elegans cdk-8(tm1238) null mutants (vs. WT N2 worms)
GSE71770 Microgravity effect on C. elegans N2/VC (CERISE, 4 days)
GSE71771 Expression Data from International C. elegans Experiment 1st (Agilent)
GSE73282 Transcriptional profiling of C. elegans aptf-1(gk7954) mutant in L4 sleep stage.
GSE73283 Transcriptional profiling of C. elegans aptf-1(gk7954) mutant in pretzel-stage embryos.
GSE81592 C. elegans gene expression in response to acute Pseudomonas aeruginosa infection (Part 1) and recovery (Part 2) by Neomycin/Streptomycin treatment
GSE86312 Predator-prey interactions between bacteria and the nematode Caenorhabditis elegans via interkingdom signaling molecule indole
GSE86342 The gene expression of wild-type worms and kin-1(ok338) mutant worms exposing Salmonella entericaSL1344 at 24 hours
GSE93149 Characterization of gene expression associated with the adaptation of the nematode C. elegans to hypoxia and reoxygenation stress
GSE126656 The transcription factors TFEB and TFE3 link the FLCN-AMPK signaling axis to innate immune response and pathogen resistance
GSE128029 The transcription factors TFEB and TFE3 link the FLCN-AMPK signaling axis to innate immune response and pathogen resistance [array]
GSE133703 The effect of hydrostatic pressure in C. elegans
GSE144059 To measure extension longevity effect of soraprazan and identify the mechanism
GSE157800 Loss of the seipin gene perturbs eggshell formation in Caenorhabditis elegans
GSE173985 The effect of microgtavity on the epigenetic modification in C. elegans - JAXA "EPIGENETICS" spaceflight experiment
GSE210389 Tracking gene expression changes following aging of C. elegans
GSE220955 Genome wide expression analysis of Caenorhabditis elegans mdt-15(tm2182) null mutants (vs. WT N2 worms)
Relations Alternative to
GPL10094
Data table header descriptions ID Agilent feature number
SPOT_ID Spot identifier
CONTROL_TYPE Control type
REFSEQ RefSeq Accession number
GB_ACC GenBank Accession number
GENE Entrez Gene ID
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
UNIGENE_ID UnigeneID
ENSEMBL_ID EnsemblID
TIGR_ID TIGRID
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
CYTOBAND Cytoband
DESCRIPTION Description
GO_ID GoIDs
SEQUENCE Sequence
Data table ID SPOT_ID CONTROL_TYPE REFSEQ GB_ACC GENE GENE_SYMBOL GENE_NAME UNIGENE_ID ENSEMBL_ID TIGR_ID ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND DESCRIPTION GO_ID SEQUENCE (+)E1A_r60_1
(+)E1A_r60_1
pos
(+)E1A_r60_3
(+)E1A_r60_3
pos
(+)E1A_r60_a104
(+)E1A_r60_a104
pos
(+)E1A_r60_a107
(+)E1A_r60_a107
pos
(+)E1A_r60_a135
(+)E1A_r60_a135
pos
(+)E1A_r60_a20
(+)E1A_r60_a20
pos
(+)E1A_r60_a22
(+)E1A_r60_a22
pos
(+)E1A_r60_a97
(+)E1A_r60_a97
pos
(+)E1A_r60_n11
(+)E1A_r60_n11
pos
(+)E1A_r60_n9
(+)E1A_r60_n9
pos
(+)eQC-39
(+)eQC-39
pos
(+)eQC-40
(+)eQC-40
pos
(+)eQC-41
(+)eQC-41
pos
(+)eQC-42
(+)eQC-42
pos
(-)3xSLv1
(-)3xSLv1
neg
A_12_P100000
A_12_P100000
FALSE
NM_001047268 NM_001047268 182402 fbxa-158
F-box A protein
Cel.24147
wb|C08E3.10a|wb|C08E3.10b|ref|NM_001047268|ref|NM_001047269
chrII:1619962-1619903
This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. [Source: WormBase] [C08E3.10a]
GO:0040010(positive regulation of growth rate)
TTTATAGTTATTTGTTCCGAATCACAAAGTTGAGCTACAGATACGATTACAACGATTGGC
A_12_P100002
A_12_P100002
FALSE
NM_071140 NM_071140 188270 fbxa-201
F-box A protein
Cel.23837
wb|T08B1.5|ref|NM_071140|tc|NP006945|tc|TC197352
chrV:1977191-1977250
none available [T08B1.5]
TTTTCCTATCAAATCGGCAATTCTTCCTTCACTATCCACTGGCAAAAACGTGGATTCCAG
A_12_P100003
A_12_P100003
FALSE
NM_075964 NM_075964 186105 F52D2.6
hypothetical protein
Cel.24609
wb|F52D2.6|ref|NM_075964|tc|TC179727
chrX:1980423-1980482
none available [F52D2.6]
TTGCACACCTTCACACTACAGATATGGTCTTGTACAAGAATGCAAAACGTGGTTGGCTCA
A_12_P100004
A_12_P100004
FALSE
NM_064828 NM_064828 189252 W06E11.1
hypothetical protein
Cel.9927
wb|W06E11.1|ref|NM_064828|tc|TC195925
chrIII:645462-645521
none available [W06E11.1]
GO:0002119(nematode larval development)|GO:0003899(DNA-directed RNA polymerase activity)|GO:0005634(nucleus)|GO:0006351(transcription, DNA-dependent)|GO:0006898(receptor-mediated endocytosis)|GO:0009792(embryo development ending in birth or egg hatching)|GO:0016246(RNA interference)|GO:0040007(growth)|GO:0040010(positive regulation of growth rate)|GO:0040011(locomotion)
AGAAATTTAATGAATTGGAGAAGTCGCTGCAGGAATCGCCTGCCAAGTCCCCGAAGAAAA
A_12_P100005
A_12_P100005
FALSE
NM_074719 NM_074719 180096 oac-7
O-ACyltransferase homolog
Cel.4624
wb|C31A11.7|ref|NM_074719|tc|NP947413|tc|TC189531
chrV:16314653-16314712
none available [C31A11.7]
GO:0016021(integral to membrane)|GO:0016747(transferase activity, transferring acyl groups other than amino-acyl groups)
AGAACTCACACAGGTGGAAACTTTAGTACAAGAGAGCAACGCGGGAAGTGAAGAGCAATT
43663 18538 Kbytes .Supplementary data files not provided
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