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| Status |
Public on Jan 30, 2013 |
| Title |
NimbleGen_Fundulus heteroclitus_Expression Array_12x135k_All Probes [DesignID 11308] |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Fundulus heteroclitus |
| Manufacturer |
NimbleGen |
| Manufacture protocol |
High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.
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| Description |
This is a killifish (Fundulus heteroclitus) whole-genome expression array in HD2 12x135K format manufactured by Roche NimbleGen.
DESIGN_ID : 11308
native array description file : 100129_FH_JC_EXP.ndf
native array description file : 100129_FH_JC_EXP.txt
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| Submission date |
Dec 12, 2011 |
| Last update date |
Sep 25, 2017 |
| Contact name |
Jacqueline Lopez |
| E-mail(s) |
[email protected]
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| Phone |
574-631-1902
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| Organization name |
University of Notre Dame
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| Department |
Biology
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| Lab |
Pfrender Laboratory
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| Street address |
019 Galvin Life Science Center
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| City |
Notre Dame |
| State/province |
Indiana |
| ZIP/Postal code |
46556 |
| Country |
USA |
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| Samples (108)
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GSM1143492, GSM1143493, GSM1143494, GSM1143495, GSM1143496, GSM1143497
GSM1143498, GSM1143499, GSM1143500, GSM1143501, GSM1143502, GSM1143503, GSM1143504, GSM1143505, GSM1143506, GSM1143507, GSM1143508, GSM1143509, GSM1143510, GSM1143511, GSM1143512, GSM1143513, GSM1143514, GSM1143515, GSM1143516, GSM1143517, GSM1143518, GSM1143519, GSM1143520, GSM1143521, GSM1143522, GSM1143523, GSM1143524, GSM1143525, GSM1143526, GSM1143527, GSM2792701, GSM2792702, GSM2792703, GSM2792704, GSM2792705, GSM2792706, GSM2792707, GSM2792708, GSM2792709, GSM2792710, GSM2792711, GSM2792712, GSM2792713, GSM2792714, GSM2792715, GSM2792716, GSM2792717, GSM2792718, GSM2792719, GSM2792720, GSM2792721, GSM2792722, GSM2792723, GSM2792724, GSM2792725, GSM2792726, GSM2792727, GSM2792728, GSM2792729, GSM2792730, GSM2792731, GSM2792732, GSM2792733, GSM2792734, GSM2792735, GSM2792736, GSM2792737, GSM2792738, GSM2792739, GSM2792740, GSM2792741, GSM2792742, GSM2792743, GSM2792744, GSM2792745, GSM2792746, GSM2792747, GSM2792748, GSM2792749, GSM2792750, GSM2792751, GSM2792752, GSM2792753, GSM2792754, GSM2792755, GSM2792756, GSM2792757, GSM2792758, GSM2792759, GSM2792760, GSM2792761, GSM2792762, GSM2792763, GSM2792764, GSM2792765, GSM2792766, GSM2792767, GSM2792768, GSM2792769, GSM2792770, GSM2792771, GSM2792772
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| Series (2) |
| GSE47035 |
Genes enabling phenotypic plasticity evolve canalized gene expression by their limited associations with transcriptional regulators |
| GSE104218 |
Expression analysis of Fudulus heteroclitus populations exposed to arsenic during hypo-osmotic shock |
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| Data table header descriptions |
| ID |
Probe_ID |
| DESIGN_ID |
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| PROBE_DESIGN_ID |
NimbleGen design reference |
| SEQ_ID |
Custom sequence ID |
| SEQUENCE |
Probe sequence |
| Data table |
| ID |
DESIGN_ID |
PROBE_DESIGN_ID |
SEQ_ID |
SEQUENCE |
| FQIZ98O02HP1VFP00003 |
11308 |
11308_0188_0214 |
FQIZ98O02HP1VF |
TGTTTTGGAGTTCGCATCACTCATGCGTCTGCAGTGTGTTTGGCCATTTGTGGCATGTTC |
| contig12720P00018 |
11308 |
11308_0190_0214 |
contig12720 |
TCAAAGAAGAGCCTGTTTGAAGCTGGAGAAGCCTGGAACCAAAACGCCACCTCAGTCACA |
| contig00397P00058 |
11308 |
11308_0192_0214 |
contig00397 |
AGTCTACAGCCACAGAGAGGGACGTCAGTATTCAGATCGGTTGGATCTCAGCGGCAGAGG |
| contig00607P00121 |
11308 |
11308_0194_0214 |
contig00607 |
TGATCTGTATGTGACCACTTTGTTGAACCTAAATTGAAGAAATGCAGTGAGAAGACTTTT |
| contig06521P00661 |
11308 |
11308_0196_0214 |
contig06521 |
TGAGGAAGGTGGCATGTCTTTGTGATCCCTCCAAGTCAACTGGAAGTCGAGACCTTCTCC |
| contig06614P00804 |
11308 |
11308_0198_0214 |
contig06614 |
GAGCGAAGGCAGTCTTCATCGGTCGCCCAGTGTTGTGGGGGCTTGCCTGTCAGGGAGAAG |
| contig01050P00245 |
11308 |
11308_0200_0214 |
contig01050 |
AACCAGCTGTGACATGGGCCATGGAGGAGCCGGCTTGATGATTCAGCAGATGGTTGTTGC |
| contig05460P00111 |
11308 |
11308_0202_0214 |
contig05460 |
ATAGCGTTACATTAGCAGGAACGGTCCAGTTTGGTTATTCAGTGAAGAGCCTGTGGATGA |
| contig29816P00507 |
11308 |
11308_0204_0214 |
contig29816 |
TGTTCTTCATCTACAATGACTCGCTATGATTTCATTCTTCAAAAACTCCTTCATGTTGAA |
| contig16810P00163 |
11308 |
11308_0206_0214 |
contig16810 |
CATCTTTACCAAATTTGAAATGCACTCAAATAGGGAACTGGATGTCGCGCGAAGAAGGCA |
| FQIZ98O01CXMGLP00001 |
11308 |
11308_0208_0214 |
FQIZ98O01CXMGL |
ATATAGTTCACAAACCTGCATGTCAGCGCTTCTCCTCAGTTGAAGTTCCTGCAGCCTTTT |
| contig05718P00706 |
11308 |
11308_0210_0214 |
contig05718 |
TGGAGTCAGAAGCCCTATAGTGTGCCATGATGATATGGGCTGTAAAGCTTAATATTGGAG |
| contig37054P00152 |
11308 |
11308_0212_0214 |
contig37054 |
GCTCCATAATAGATCCAGGGCTACAAATATGAATATTTATTATAGAAGCGTATAATTTAT |
| contig31450P00305 |
11308 |
11308_0214_0214 |
contig31450 |
ACAGAGAAATATGCGCACGCTGGATATGTCGGTGGTCAAAGGTGATGTACAAGGTTTGCT |
| FQIZ98O01DKAIKP00174 |
11308 |
11308_0216_0214 |
FQIZ98O01DKAIK |
TATTTAGCTGCATGAGTTTTTCACACGTGCGTTCCATGCATTCATACACCGACTGCAGAG |
| contig23258P00164 |
11308 |
11308_0218_0214 |
contig23258 |
GAGCCAACAAAGCCAGCTGCCTTGCTGACACCGTCATGGCTAAAGGAACCGGGGCCTGCA |
| contig04830P00316 |
11308 |
11308_0222_0214 |
contig04830 |
ATTCTGGACCTGTATTGCTCAGGGAAGCCAGAATGGATGGGGAAGTTATAGAGGCGCGAG |
| contig37503P00025 |
11308 |
11308_0224_0214 |
contig37503 |
CGCTGCAGTTTCTCCATGTCTTTAATCACGTTTGGTGGCTGGCTGTCAATTGGTGTTATT |
| FL243VO02MPNEQP00177 |
11308 |
11308_0226_0214 |
FL243VO02MPNEQ |
TGATGGTAAGATAGTGTCCTCCTGCACAGGAAAGGCCTCAAAAAGCTACCATTAATCACA |
| contig07219P00194 |
11308 |
11308_0228_0214 |
contig07219 |
TAAACACAGCAGTATGAGTGACATGTAAGAAACGTCGTCAAATGTGGCTAAAGTTCTGGA |
Total number of rows: 135000
Table truncated, full table size 15092 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GPL14994_100129_FH_JC_EXP.ndf.gz |
7.9 Mb |
(ftp)(http) |
NDF |
| GPL14994_100129_FH_JC_EXP.txt.gz |
4.5 Mb |
(ftp)(http) |
TXT |
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