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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Aug 14, 2012 |
| Title |
Candida tropicalis 12.5K v1.0 |
| Technology type |
spotted oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Candida tropicalis |
| Manufacturer |
Agilent |
| Manufacture protocol |
Default Agilent protocol
|
| Catalog number |
Amadid #029445 |
| Support |
glass |
| Coating |
unknown |
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| Description |
8 x 15k array
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| Web link |
http://www.pnas.org/content/108/52/21158.long
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| Contributor(s) |
Porman AM, Richard BJ |
| Citation(s) |
22158989 |
| Submission date |
Aug 10, 2012 |
| Last update date |
Aug 14, 2012 |
| Contact name |
Richard J Bennett |
| E-mail(s) |
[email protected]
|
| Organization name |
Brown University
|
| Department |
Molecular Microbiology and Immunology
|
| Lab |
Bennett Lab
|
| Street address |
171 Meeting St
|
| City |
Providence |
| State/province |
RI |
| ZIP/Postal code |
02912 |
| Country |
USA |
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| Samples (32)
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GSM987862, GSM987863, GSM987864, GSM987865, GSM987866, GSM987867
GSM987868, GSM987869, GSM1041356, GSM1041357, GSM1041358, GSM1041359, GSM1041360, GSM1041361, GSM1041362, GSM1041363, GSM1041364, GSM1041365, GSM1041366, GSM1041367, GSM1041368, GSM1041369, GSM1041370, GSM1041371, GSM1059702, GSM1059703, GSM1059704, GSM1059705, GSM1273074, GSM1273075, GSM1273076, GSM1273077
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| Series (4)
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| GSE40179 |
Discovery of a phenotypic switch regulating sexual mating in the opportunistic fungal pathogen Candida tropicalis |
| GSE42517 |
C. tropicalis a/alpha white, opaque, tdh3-wor, wor1 mutants |
| GSE43267 |
C. tropicalis a biofilms of opaque and wor1 overexpressers |
| GSE52634 |
C. tropicalis cells under in vitro biofilm-forming conditions |
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| Data table header descriptions |
| ID |
|
| ORF |
Candida Database accession ID |
| RANGE_START |
Start site of the oligonucleutide sequence |
| SEQUENCE |
Sequence of the oligonucleotide used on the array |
| Data table |
| ID |
ORF |
RANGE_START |
SEQUENCE |
| A1 |
CTRG_00001 |
2281 |
GGTATGGCATTATTTAGTATTGTGGCCTATAACTACGCTCGCAGAGTGACAGGCTTGTGA |
| A2 |
CTRG_00001 |
2218 |
ATGAACTGTATTGTCCCCGGACAAGATTATGAGGGATTGGCATGGTTCTGGGGAATTGTT |
| A3 |
CTRG_00002 |
488 |
TTGCCAATTTACAAAAGGCATACGACACATTAACCCCAGAAGAGAAAAAGGGTAAAGATG |
| A4 |
CTRG_00002 |
383 |
TCCGCCAATCCAAAACAAACACCGTTGATGATGCTGCTGAAGTTGAAAAATTAAAACATT |
| A5 |
CTRG_00003 |
2248 |
GATCAAGAGATTCCTACTTTTAGAAATATTGTTTCCGGAAGCTACAGTGGACATTCCTAA |
| A6 |
CTRG_00003 |
2188 |
GTTCAAATAAAATTCCAAGTTAGGGACCCACCTTTTAAGTATGCCAGTATCTATGCTGGT |
| A7 |
CTRG_00004 |
1396 |
GCAATCGATGGTGTTGTAGATGGTTCAAGTAACAACGAATCTGGCGAAGCCAAAGTGTAA |
| A8 |
CTRG_00004 |
1336 |
TACGTCTTGGAACCAATCAGAAGTTCTCATGTCCAACAAAAGCATGACGAGCCAATGGCA |
| A9 |
CTRG_00005 |
3955 |
AAGAGTTCAGGAAGTGCAACTTGTCCACTTTGTCGTTCTGCATTCAATTTTAAGAAATGA |
| A10 |
CTRG_00005 |
3895 |
TCCAAAACATGTCCAACATGTTCTAACAAATTCCATGCTGCATGTCTTTATAAATGGTTC |
| A11 |
CTRG_00006 |
1043 |
CTGGTCAAAAGTACCTCGGAGGGAAAGAAGATGACATAACAGTGGTGATGATAAAAGTTA |
| A12 |
CTRG_00006 |
983 |
TCAGAGTCAGCAAAGACAGCAATTTTCCAAGTGCATTCGCTCAAGAGTTGTCAAGATTAA |
| A13 |
CTRG_00007 |
217 |
TGGGAAGATCCAAACTTGGACATTGGCAAAGCCTTGGAATCTTTAATTCAAAAATTGGAC |
| A14 |
CTRG_00007 |
197 |
CCACTTCTGGTTCAATCAATTGGGAAGATCCAAACTTGGACATTGGCAAAGCCTTGGAAT |
| A15 |
CTRG_00008 |
907 |
CCCGAATGTCCATTATGTCGTCAACAATGTTTAGAACAACACTTGTTACCGTTGAGATGA |
| A16 |
CTRG_00008 |
797 |
AATCGTCAAGAAGTTGTATGTTGTGCTTATCCCCAATGGTGAATCCTTCTGCCGCCAACT |
| A17 |
CTRG_00009 |
949 |
GAGCATTACAAGGCTTTATCTAAGAAACTTCACAAGAGATGGTGGAAGTTCTGGGAGTAA |
| A18 |
CTRG_00009 |
881 |
TTCAAGACCATGACTTTGTGGTAAACATGGCTGGTTGTGAATGGGGTAGAGATTGTTGGG |
| A19 |
CTRG_00010 |
2959 |
GGTAAAGAAGTTGTAAGGTTGCTTAGATATTTGAAAGATTTGAAGGCTTGTGAGGGAATA |
| A20 |
CTRG_00010 |
2899 |
ATCCCAGATTCCATTCTAACTTTGGACACATTTTTGGCACCTACAATTGATACCAGTTTA |
Total number of rows: 12498
Table truncated, full table size 1008 Kbytes.
| Supplementary data files not provided |
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