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Status
Public on Nov 03, 2012
Title
[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [CDF: CHOP_1.0_ENTREZG]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens Manufacturer
Affymetrix
Manufacture protocol
See manufacturer's web site
Description
Probe sequences were downloaded from Affymetrix web site and mapped human genome hg19. Probes having mismatch, ambiguous mapping, or overlapping to dbSNP entries were excluded. The remaining probes were grouped into NCBI Entrez genes.
Submission date
Nov 02, 2012
Last update date
Nov 03, 2012
Contact name
Zhe Zhang
E-mail(s)
[email protected] Organization name
University of Pennsylvania
Street address
Translational Research Lab
City
Philadelphia
State/province
PA
ZIP/Postal code
19104
Country
USA
Samples (53)
GSM1054461 , GSM1054462 , GSM1054463 , GSM1054464 , GSM1054465 , GSM1054466
GSM1054467 ,
GSM1054468 ,
GSM1054469 ,
GSM1054470 ,
GSM1054471 ,
GSM1054472 ,
GSM1054473 ,
GSM1054474 ,
GSM1054475 ,
GSM1054476 ,
GSM1054477 ,
GSM1054478 ,
GSM1054479 ,
GSM1054480 ,
GSM1054481 ,
GSM1054482 ,
GSM1054483 ,
GSM1054484 ,
GSM1054485 ,
GSM1054486 ,
GSM1054487 ,
GSM1054488 ,
GSM1054489 ,
GSM1054490 ,
GSM1054491 ,
GSM1054492 ,
GSM1054493 ,
GSM1054494 ,
GSM1054495 ,
GSM1054496 ,
GSM1054497 ,
GSM1054498 ,
GSM1054499 ,
GSM1054500 ,
GSM1054501 ,
GSM1054502 ,
GSM1054503 ,
GSM1054504 ,
GSM1054505 ,
GSM1054506 ,
GSM1054507 ,
GSM1054508 ,
GSM1054509 ,
GSM1054510 ,
GSM1054511 ,
GSM1054512 ,
GSM1054513 Series (1)
GSE42986 Transcriptome profiling in human primary mitochondrial respiratory chain disease
Relations Alternative to
GPL5175 (Alternative CDF [official])
Data table header descriptions ID Gene_ID NCBI Entrez gene ID
ORF orf name
Symbol Official gene symbol
Chromosome Gene location
RefSeq_ID RefSeq ID
Num_Probes Total number of probes
Full_Name Full gene name
Data table ID Gene_ID ORF Symbol Chromosome RefSeq_ID Num_Probes Full_Name 1_at
1
A1BG A1BG
19
NM_130786;NP_570602
47
alpha-1-B glycoprotein
2_at
2
A2M A2M
12
NM_000014;NP_000005
167
alpha-2-macroglobulin
9_at
9
NAT1 NAT1
8
NM_000662;NM_001160170;NM_001160171;NM_001160172;NM_001160173;NM_001160174;NM_001160175;NM_001160176;NM_001160179;NP_000653;NP_001153642;NP_001153643;NP_001153644;NP_001153645;NP_001153646;NP_001153647;NP_001153648;NP_001153651
74
N-acetyltransferase 1 (arylamine N-acetyltransferase)
10_at
10
NAT2 NAT2
8
NM_000015;NP_000006
20
N-acetyltransferase 2 (arylamine N-acetyltransferase)
12_at
12
SERPINA3 SERPINA3
14
NM_001085;NP_001076
56
"serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3"
13_at
13
AADAC AADAC
3
NM_001086;NP_001077
36
arylacetamide deacetylase (esterase)
14_at
14
AAMP AAMP
2
NM_001087;NP_001078
54
"angio-associated, migratory cell protein"
15_at
15
AANAT AANAT
17
NM_001088;NM_001166579;NP_001079;NP_001160051
34
aralkylamine N-acetyltransferase
16_at
16
AARS AARS
16
NM_001605;NP_001596
100
alanyl-tRNA synthetase
18_at
18
ABAT ABAT
16
NM_000663;NM_001127448;NM_020686;NP_000654;NP_001120920;NP_065737
177
4-aminobutyrate aminotransferase
19_at
19
ABCA1 ABCA1
9
NM_005502;NP_005493
300
"ATP-binding cassette, sub-family A (ABC1), member 1"
20_at
20
ABCA2 ABCA2
9
NM_001606;NM_212533;NP_001597;NP_997698
217
"ATP-binding cassette, sub-family A (ABC1), member 2"
21_at
21
ABCA3 ABCA3
16
NM_001089;NP_001080
193
"ATP-binding cassette, sub-family A (ABC1), member 3"
22_at
22
ABCB7 ABCB7
X
NM_004299;NP_004290
69
"ATP-binding cassette, sub-family B (MDR/TAP), member 7"
24_at
24
ABCA4 ABCA4
1
NM_000350;NP_000341
216
"ATP-binding cassette, sub-family A (ABC1), member 4"
25_at
25
ABL1 ABL1
9
NM_005157;NM_007313;NP_005148;NP_009297
70
"c-abl oncogene 1, non-receptor tyrosine kinase"
26_at
26
ABP1 ABP1
7
NM_001091;NP_001082
40
amiloride binding protein 1 (amine oxidase (copper-containing))
27_at
27
ABL2 ABL2
1
NM_001136000;NM_001136001;NM_001168236;NM_001168237;NM_001168238;NM_001168239;NM_005158;NM_007314;NP_001129472;NP_001129473;NP_001161708;NP_001161709;NP_001161710;NP_001161711;NP_005149;NP_009298
104
v-abl Abelson murine leukemia viral oncogene homolog 2
28_at
28
ABO ABO
9
NM_020469;NP_065202
39
"ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)"
29_at
29
ABR ABR
17
NM_001092;NM_001159746;NM_021962;NP_001083;NP_001153218;NP_068781
240
active BCR-related gene
20788 2146 Kbytes .Supplementary file Size Download File type/resource GPL16240_annotation.csv.gz
717.4 Kb
(ftp) (http) CSV
GPL16240_huex_chop_alt1.cdf.gz
7.6 Mb
(ftp) (http) CDF
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