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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Oct 25, 2013 |
| Title |
NanoString nCounter Nano105 Gene Expression Custom CodeSet |
| Technology type |
other |
| Distribution |
virtual |
| Organism |
Homo sapiens |
| Manufacturer |
NanoString Technologies |
| Manufacture protocol |
See manufacturer's website http://www.nanostring.com
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| |
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| |
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| Submission date |
Apr 25, 2013 |
| Last update date |
May 21, 2014 |
| Contact name |
Aleix Prat |
| E-mail(s) |
[email protected]
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| Organization name |
VHIO
|
| Department |
Translational Genomics
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| Street address |
Passeig Vall d´Hebron 119
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| City |
Barcelona |
| ZIP/Postal code |
08035 |
| Country |
Spain |
| |
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| Samples (417)
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GSM1129519, GSM1129520, GSM1129521, GSM1129522, GSM1129523, GSM1129524
GSM1129525, GSM1129526, GSM1129527, GSM1129528, GSM1129529, GSM1129530, GSM1129531, GSM1129532, GSM1129533, GSM1129534, GSM1129535, GSM1129536, GSM1129537, GSM1129538, GSM1129539, GSM1331751, GSM1331752, GSM1331753, GSM1331754, GSM1331755, GSM1331756, GSM1331757, GSM1331758, GSM1331759, GSM1331760, GSM1331761, GSM1331762, GSM1331763, GSM1331764, GSM1331765, GSM1331766, GSM1331767, GSM1331768, GSM1331769, GSM1331770, GSM1331771, GSM1331772, GSM1331773, GSM1331774, GSM1331775, GSM1331776, GSM1331777, GSM1331778, GSM1331779, GSM1331780, GSM1331781, GSM1331782, GSM1331783, GSM1331784, GSM1331785, GSM1331786, GSM1331787, GSM1331788, GSM1331789, GSM1331790, GSM1331791, GSM1331792, GSM1331793, GSM1331794, GSM1331795, GSM1331796, GSM1331797, GSM1331798, GSM1331799, GSM1331800, GSM1331801, GSM1331802, GSM1331803, GSM1331804, GSM1331805, GSM1331806, GSM1331807, GSM1331808, GSM1331809, GSM1331810, GSM1331811, GSM1331812, GSM1331813, GSM1331814, GSM1331815, GSM1331816, GSM1331817, GSM1331818, GSM1331819, GSM1331820, GSM1331821, GSM1331822, GSM1331823, GSM1331824, GSM1331825, GSM1331826, GSM1331827, GSM1331828, GSM1331829, GSM1331830, GSM1331831, GSM1331832, GSM1331833, GSM1331834, GSM1331835, GSM1331836, GSM1331837, GSM1331838, GSM1331839, GSM1331840, GSM1331841, GSM1331842, GSM1331843, GSM1331844, GSM1331845, GSM1331846, GSM1331847, GSM1331848, GSM1331849, GSM1331850, GSM1331851, GSM1331852, GSM1331853, GSM1331854, GSM1331855, GSM1331856, GSM1331857, GSM1331858, GSM1331859, GSM1331860, GSM1331861, GSM1331862, GSM1331863, GSM1331864, GSM1331865, GSM1331866, GSM1331867, GSM1331868, GSM1331869, GSM1331870, GSM1331871, GSM1331872, GSM1331873, GSM1331874, GSM1331875, GSM1331876, GSM1331877, GSM1331878, GSM1331879, GSM1331880, GSM1331881, GSM1331882, GSM1331883, GSM1331884, GSM1331885, GSM1331886, GSM1331887, GSM1331888, GSM1553122, GSM1553123, GSM1553124, GSM1553125, GSM1553126, GSM1553127, GSM1553128, GSM1553129, GSM1553130, GSM1553131, GSM1553132, GSM1553133, GSM2441087, GSM2441088, GSM2441089, GSM2441090, GSM2441091, GSM2441092, GSM2441093, GSM2441094, GSM2441095, GSM2441096, GSM2441097, GSM2441098, GSM2441099, GSM2441100, GSM2441101, GSM2441102, GSM2441103, GSM2441104, GSM2441105, GSM2441106, GSM2441107, GSM2441108, GSM2441109, GSM2441110, GSM2441111, GSM2441112, GSM2441113, GSM2441114, GSM2441115, GSM2441116, GSM2441117, GSM2441118, GSM2441119, GSM2441120, GSM2441121, GSM2441122, GSM2441123, GSM2441124, GSM2441125, GSM2441126, GSM2441127, GSM2441128, GSM2441129, GSM2441130, GSM2441131, GSM2441132, GSM2441133, GSM2441134, GSM2441135, GSM2441136, GSM2441137, GSM2441138, GSM2441139, GSM2441140, GSM2441141, GSM2441142, GSM2441143, GSM2441144, GSM2441145, GSM2441146, GSM2441147, GSM2441148, GSM2441149, GSM2441150, GSM2441151, GSM2441152, GSM2441153, GSM2441154, GSM2441155, GSM2441156, GSM2441157, GSM2441158, GSM2441159, GSM2441160, GSM2441161, GSM2441162, GSM2441163, GSM2441164, GSM2441165, GSM2441166, GSM2441167, GSM2441168, GSM2441169, GSM2441170, GSM2441171, GSM2441172, GSM2441173, GSM2441174, GSM2441175, GSM2441176, GSM2441177, GSM2441178, GSM2441179, GSM2441180, GSM2441181, GSM2441182, GSM2441183, GSM2441184, GSM2441185, GSM2441186, GSM2441187, GSM2441188, GSM2441189, GSM2441190, GSM2441191, GSM2441192, GSM2441193, GSM2441194, GSM2441195, GSM2441196, GSM2441197, GSM2441198, GSM2441199, GSM2441200, GSM2441201, GSM2441202, GSM2441203, GSM2441204, GSM2441205, GSM2441206, GSM2441207, GSM2441208, GSM2441209, GSM2441210, GSM2441211, GSM2441212, GSM2441213, GSM2441214, GSM2441215, GSM2441216, GSM2441217, GSM2441218, GSM2441219, GSM2441220, GSM2441221, GSM2441222, GSM2441223, GSM2441224, GSM2441225, GSM2441226, GSM2441227, GSM2441228, GSM2441229, GSM2441230, GSM2441231, GSM2441232, GSM2441233, GSM2441234, GSM2441235, GSM2441236, GSM2441237, GSM2441238, GSM2441239, GSM2441240, GSM2441241, GSM2441242, GSM2441243, GSM2441244, GSM2441245, GSM2441246, GSM2441247, GSM2441248, GSM2441249, GSM2441250, GSM2441251, GSM2441252, GSM2441253, GSM2441254, GSM2441255, GSM2441256, GSM2441257, GSM2441258, GSM2441259, GSM2441260, GSM2441261, GSM2441262, GSM2441263, GSM2441264, GSM2441265, GSM2441266, GSM2441267, GSM2441268, GSM2441269, GSM2441270, GSM2441271, GSM2441272, GSM2441273, GSM2441274, GSM2441275, GSM2441276, GSM2441277, GSM2441278, GSM2441279, GSM2441280, GSM2441281, GSM2441282, GSM2441283, GSM2441284, GSM2441285, GSM2441286, GSM2441287, GSM2441288, GSM2441289, GSM2441290, GSM2441291, GSM2441292, GSM2441293, GSM2441294, GSM2441295, GSM2441296, GSM2441297, GSM2441298, GSM2441299, GSM2441300, GSM2441301, GSM2441302, GSM2441303, GSM2441304, GSM2441305, GSM2441306, GSM2441307, GSM2441308, GSM2441309, GSM2441310, GSM2441311, GSM2441312, GSM2441313, GSM2441314, GSM2441315, GSM2441316, GSM2441317, GSM2441318, GSM2441319, GSM2441320, GSM2441321, GSM2441322, GSM2441323, GSM2441324, GSM2441325, GSM2441326, GSM2441327, GSM2441328, GSM2441329, GSM2441330, GSM2441331, GSM2441332
|
| Series (4)
|
| GSE46350 |
Potential Biomarkers of Long-term Benefit from Single-agent Trastuzumab or Lapatinib in HER2-positive Metastatic Breast Cancer |
| GSE55224 |
A Gene Expression-based Predictor of Fibroepithelial Lesions of the Breast |
| GSE63579 |
Enhancement of ER function by PI3K inhibition limits the antitumor effects of PI3K inhibitors in breast cancer |
| GSE92977 |
Intrinsic subtype and gene expression changes between matched primary and metastatic samples of breast cancer patients |
|
| Data table header descriptions |
| ID |
|
| Gene Symbol |
|
| GB_ACC |
RefSeq Accession Number |
| Targ Region |
|
| SEQUENCE |
Target Sequence |
| Data table |
| ID |
Gene Symbol |
GB_ACC |
Targ Region |
SEQUENCE |
| 1 |
ACTB |
NM_001101.2 |
1010-1110 |
TGCAGAAGGAGATCACTGCCCTGGCACCCAGCACAATGAAGATCAAGATCATTGCTCCTCCTGAGCGCAAGTACTCCGTGTGGATCGGCGGCTCCATCCT |
| 2 |
ACTR3B |
NM_001040135.1 |
275-375 |
GGGAGTTGATGACCTTGACTTTTTCATAGGAGATGAAGCCATCGATAAACCTACATATGCTACAAAGTGGCCGATACGACATGGAATCATTGAAGACTGG |
| 3 |
ADM |
NM_001124.1 |
1300-1400 |
GCGAGGTGTAAAGTTGTTCGCCGCGTGGAATGTGAGTGTGTTTGTGTGCATGAAAGAGAAAGACTGATTACCTCCTGTGTGGAAGAAGGAAACACCGAGT |
| 4 |
ANGPTL4 |
NM_001039667.1 |
1136-1236 |
CACCTGCAGCCATTCCAACCTCAACGGCCAGTACTTCCGCTCCATCCCACAGCAGCGGCAGAAGCTTAAGAAGGGAATCTTCTGGAAGACCTGGCGGGGC |
| 5 |
ANLN |
NM_018685.2 |
1900-2000 |
ATGACCTCTTCAGTGATGTCCTAGAGGAAGGTGAACTAGATATGGAGAAGAGCCAAGAGGAGATGGATCAAGCATTAGCAGAAAGCAGCGAAGAACAGGA |
| 6 |
AXL |
NM_001699.4 |
1897-1997 |
CTGGAGGATTTCCTGAGTGAAGCGGTCTGCATGAAGGAATTTGACCATCCCAACGTCATGAGGCTCATCGGTGTCTGTTTCCAGGGTTCTGAACGAGAGA |
| 7 |
BAG1 |
NM_004323.3 |
1490-1590 |
CTCTTGTGATCGTGTAGTCCCATAGCTGTAAAACCAGAATCACCAGGAGGTTGCACCTAGTCAGGAATATTGGGAATGGCCTAGAACAAGGTGTTTGGCA |
| 8 |
BCL2 |
NM_000633.2 |
1525-1625 |
CCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACG |
| 9 |
BIRC5 |
NM_001012270.1 |
1095-1195 |
AGCCATTCTAAGTCATTGGGGAAACGGGGTGAACTTCAGGTGGATGAGGAGACAGAATAGAGTGATAGGAAGCGTCTGGCAGATACTCCTTTTGCCACTG |
| 10 |
BLVRA |
NM_000712.3 |
925-1025 |
CCTGGGGCTTGCAGAAGAAATCCAGAAATATTGCTGTTCAAGGAAGTAAGAGGAGGAGGTGATGTAGCACTTCCAAGATGGCACCAGCATTTGGTTCTTC |
| 11 |
CAV1 |
NM_001753.3 |
434-534 |
AACCGCGACCCTAAACACCTCAACGATGACGTGGTCAAGATTGACTTTGAAGATGTGATTGCAGAACCAGAAGGGACACACAGTTTTGACGGCATTTGGA |
| 12 |
CCNB1 |
NM_031966.2 |
715-815 |
AACTTGAGGAAGAGCAAGCAGTCAGACCAAAATACCTACTGGGTCGGGAAGTCACTGGAAACATGAGAGCCATCCTAATTGACTGGCTAGTACAGGTTCA |
| 13 |
CCNE1 |
NM_001238.1 |
1635-1735 |
CCTCCAGACACCAGTGCGTGCTCCCGATGCTGCTATGGAAGGTGCTACTTGACCTAAGGGACTCCCACAACAACAAAAGCTTGAAGCTGTGGAGGGCCAC |
| 14 |
CD24 |
NM_013230.2 |
95-195 |
ACCGACGGAGGGGACATGGGCAGAGCAATGGTGGCCAGGCTCGGGCTGGGGCTGCTGCTGCTGGCACTGCTCCTACCCACGCAGATTTATTCCAGTGAAA |
| 15 |
CDC6 |
NM_001254.3 |
1300-1400 |
GAGATCAGGTTCTGGACAATGCTGCAGTTCAATTCTGTGCCCGCAAAGTCTCTGCTGTTTCAGGAGATGTTCGCAAAGCACTGGATGTTTGCAGGAGAGC |
| 16 |
CDC20 |
NM_001255.2 |
430-530 |
GGAACATCAGAAAGCCTGGGCTTTGAACCTGAACGGTTTTGATGTAGAGGAAGCCAAGATCCTTCGGCTCAGTGGAAAACCACAAAATGCGCCAGAGGGT |
| 17 |
CDH3 |
NM_001793.4 |
3745-3845 |
GACAGGCTATGAGTCTGACGTTAGAGTGGTGGCTTCCTTAGCCTTTCAGGATGGAGGAATGTGGGCAGTTTGACTTCAGCACTGAAAACCTCTCCACCTG |
| 18 |
CENPF |
NM_016343.3 |
5822-5922 |
AGATAATGTGGCCAAGGTGAATGACAGCTGGAAGGAGAGATTTCTTGATGTGGAAAATGAGCTGAGTAGGATCAGATCGGAGAAAGCTAGCATTGAGCAT |
| 19 |
CEP55 |
NM_001127182.1 |
558-658 |
ACGTATTGAAACAACAGTTGTCTGCTGCAACCTCACGAATTGCTGAACTTGAAAGCAAAACCAATACACTCCGTTTATCACAGACTGTGGCTCCAAACTG |
| 20 |
CLDN3 |
NM_001306.3 |
606-706 |
TGCTCACCCTCGTGCCGGTGTCCTGGTCGGCCAACACCATTATCCGGGACTTCTACAACCCCGTGGTGCCCGAGGCGCAGAAGCGCGAGATGGGCGCGGG |
Total number of rows: 110
Table truncated, full table size 14 Kbytes.
| Supplementary data files not provided |
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