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Platform GPL19572 Query DataSets for GPL19572
Status Public on Dec 20, 2014
Title [PhyloChip] Affymetrix G3 PhyloChip
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Bacteria
Manufacturer Affymetrix
Manufacture protocol See manufacturer's website (www.affymetrix.com).
 
 
Submission date Dec 19, 2014
Last update date Dec 19, 2014
Contact name Gourvendu Saxena
E-mail(s) [email protected]
Phone +6596775871
Organization name National University of Singapore
Department The Singapore Centre on Environmental Life Sciences Engineering
Street address #05-02, 28 Medical Drive
City Singapore
State/province Singapore (General)
ZIP/Postal code 117456
Country Singapore
 
Samples (23) GSM1569588, GSM1569589, GSM1569590, GSM1569591, GSM1569592, GSM1569593 
Series (2)
GSE64368 Urban waterways microbial communities (Affymetrix)
GSE64376 Urban waterways microbial communities

Data table header descriptions
ID
GB_ACC
gg_ID
Lineage
Domain
Phylum
Subphylum
Class
Order
Family
Subfamily
OTU_ID
SPOT_ID

Data table
ID GB_ACC gg_ID Lineage Domain Phylum Subphylum Class Order Family Subfamily OTU_ID SPOT_ID
gg_id:4512 AB000479 gg_id:4512 Bacteria; Proteobacteria; Alphaproteobacteria_SP; Unclassified; Unclassified; Unclassified; shE; 14689; AB000479.1 gg_id:4512 Aquaspirillum subsp. peregrinum str. IFO 14922 Bacteria Proteobacteria Alphaproteobacteria_SP Unclassified Unclassified Unclassified shE 14689
gg_id:6642 AB000701 gg_id:6642 Bacteria; Proteobacteria; Gammaproteobacteria_SP; Betaproteobacteria_CL; Nitrosomonadales; Unclassified; sfA; 19867; AB000701.1 gg_id:6642 Nitrosomonas sp. GH22 Bacteria Proteobacteria Gammaproteobacteria_SP Betaproteobacteria_CL Nitrosomonadales Unclassified sfA 19867
gg_id:15372 AB002479 gg_id:15372 Bacteria; Firmicutes; Bacilli_SP; Lactobacillales_CL; Lactobacillales; Streptococcaceae; sfA; 9859; AB002479.1 gg_id:15372 Streptococcus agalactiae str. ATCC 13813 NCTC 8181 Bacteria Firmicutes Bacilli_SP Lactobacillales_CL Lactobacillales Streptococcaceae sfA 9859
gg_id:15421 AB002483 gg_id:15421 Bacteria; Firmicutes; Bacilli_SP; Lactobacillales_CL; Lactobacillales; Streptococcaceae; sfA; 9887; AB002483.1 gg_id:15421 Streptococcus canis str. ATCC 43498 DSM 20715 Bacteria Firmicutes Bacilli_SP Lactobacillales_CL Lactobacillales Streptococcaceae sfA 9887
gg_id:15428 AB002518 gg_id:15428 Bacteria; Firmicutes; Bacilli_SP; Lactobacillales_CL; Lactobacillales; Streptococcaceae; sfA; 9891; AB002518.1 gg_id:15428 Streptococcus hyointestinalis str. ATCC 49169 DSM 20770 Bacteria Firmicutes Bacilli_SP Lactobacillales_CL Lactobacillales Streptococcaceae sfA 9891
gg_id:15456 AB002519 gg_id:15456 Bacteria; Firmicutes; Bacilli_SP; Lactobacillales_CL; Lactobacillales; Streptococcaceae; sfA; 10714; AB002519.1 gg_id:15456 Streptococcus alactolyticus str. ATCC 43492 Bacteria Firmicutes Bacilli_SP Lactobacillales_CL Lactobacillales Streptococcaceae sfA 10714
gg_id:15576 AB002520 gg_id:15576 Bacteria; Firmicutes; Bacilli_SP; Lactobacillales_CL; Lactobacillales; Streptococcaceae; sfA; 10082; AB002520.1 gg_id:15576 Streptococcus mitis str. NCTC 3165 MAFF 911479 Bacteria Firmicutes Bacilli_SP Lactobacillales_CL Lactobacillales Streptococcaceae sfA 10082
gg_id:15382 AB002523 gg_id:15382 Bacteria; Firmicutes; Bacilli_SP; Lactobacillales_CL; Lactobacillales; Streptococcaceae; sfA; 9946; AB002523.1 gg_id:15382 Streptococcus porcinus str. ATCC 43138 NCTC 10999 Bacteria Firmicutes Bacilli_SP Lactobacillales_CL Lactobacillales Streptococcaceae sfA 9946
gg_id:12231 AB002637 gg_id:12231 Bacteria; Actinobacteria; Actinobacteridae_SP; Unclassified; Unclassified; Unclassified; sfA; 55765; AB002637.1 gg_id:12231 deepest sea mud Mariana Trench clone Bacteria Actinobacteria Actinobacteridae_SP Unclassified Unclassified Unclassified sfA 55765
gg_id:14473 AB002644 gg_id:14473 Bacteria; Firmicutes; Bacilli_SP; Unclassified; Unclassified; Unclassified; sfA; 9587; AB002644.1 gg_id:14473 G+C gram-positive HTA454 Bacteria Firmicutes Bacilli_SP Unclassified Unclassified Unclassified sfA 9587
gg_id:14549 AB002646 gg_id:14549 Bacteria; Firmicutes; Bacilli_SP; Geobacillus_CL; Geobacillus_OR; Geobacillus_FM; sfA; 32872; AB002646.1 gg_id:14549 G+C gram-positive HTA462 Bacteria Firmicutes Bacilli_SP Geobacillus_CL Geobacillus_OR Geobacillus_FM sfA 32872
gg_id:3094 AB003167 gg_id:3094 Bacteria; Cyanobacteria; Unclassified; Unclassified; Unclassified; Unclassified; sfB; 57000; AB003167.1 gg_id:3094 Phormidium ambiguum str. M-71 Bacteria Cyanobacteria Unclassified Unclassified Unclassified Unclassified sfB 57000
gg_id:5009 AB003457 gg_id:5009 Bacteria; Proteobacteria; Alphaproteobacteria_SP; Bradyrhizobiales_CL; Bradyrhizobiales; Bradyrhizobium_FM; sfA; 15630; AB003457.1 gg_id:5009 Soil DNB isolate str. G14130 Bacteria Proteobacteria Alphaproteobacteria_SP Bradyrhizobiales_CL Bradyrhizobiales Bradyrhizobium_FM sfA 15630
gg_id:5010 AB003458 gg_id:5010 Bacteria; Proteobacteria; Alphaproteobacteria_SP; Bradyrhizobiales_CL; Bradyrhizobiales; Bradyrhizobium_FM; sfA; 16230; AB003458.1 gg_id:5010 Soil DNB isolate str. G14003 Bacteria Proteobacteria Alphaproteobacteria_SP Bradyrhizobiales_CL Bradyrhizobiales Bradyrhizobium_FM sfA 16230
gg_id:4984 AB003459 gg_id:4984 Bacteria; Proteobacteria; Alphaproteobacteria_SP; Bradyrhizobiales_CL; Bradyrhizobiales; Bradyrhizobium_FM; sfA; 16070; AB003459.1 gg_id:4984 Soil DNB isolate str. G14127 Bacteria Proteobacteria Alphaproteobacteria_SP Bradyrhizobiales_CL Bradyrhizobiales Bradyrhizobium_FM sfA 16070
gg_id:8890 AB004313 gg_id:8890 Bacteria; Proteobacteria; Gammaproteobacteria_SP; Alteromonadales_CL; Alteromonadales; Alteromonas_FM; sfA; 19172; AB004313.2 gg_id:8890 synonym: marine clone E401 Bacteria Proteobacteria Gammaproteobacteria_SP Alteromonadales_CL Alteromonadales Alteromonas_FM sfA 19172
gg_id:10075 AB004691 gg_id:10075 Bacteria; Proteobacteria; Gammaproteobacteria_SP; Enterobacteriales_Enterobacteriaceae_CL; Enterobacteriales_Enterobacteriaceae_OR; Enterobacteriales_Enterobacteriaceae; sfA; 28634; AB004691.1 gg_id:10075 Pantoea agglomerans str. JCM1236 Bacteria Proteobacteria Gammaproteobacteria_SP Enterobacteriales_Enterobacteriaceae_CL Enterobacteriales_Enterobacteriaceae_OR Enterobacteriales_Enterobacteriaceae sfA 28634
gg_id:12226 AB004721 gg_id:12226 Bacteria; Actinobacteria; Actinobacteridae_SP; Unclassified; Unclassified; Unclassified; sfA; 55577; AB004721.1 gg_id:12226 Microbacterium terregens str. IFO12961T Bacteria Actinobacteria Actinobacteridae_SP Unclassified Unclassified Unclassified sfA 55577
gg_id:9857 AB004748 gg_id:9857 Bacteria; Proteobacteria; Gammaproteobacteria_SP; Enterobacteriales_Enterobacteriaceae_CL; Enterobacteriales_Enterobacteriaceae_OR; Enterobacteriales_Enterobacteriaceae; sfA; 29456; AB004748.1 gg_id:9857 Enterobacter gergoviae str. JCM1234 Bacteria Proteobacteria Gammaproteobacteria_SP Enterobacteriales_Enterobacteriaceae_CL Enterobacteriales_Enterobacteriaceae_OR Enterobacteriales_Enterobacteriaceae sfA 29456
gg_id:10039 AB004750 gg_id:10039 Bacteria; Proteobacteria; Gammaproteobacteria_SP; Enterobacteriales_Enterobacteriaceae_CL; Enterobacteriales_Enterobacteriaceae_OR; Enterobacteriales_Enterobacteriaceae; sfA; 29441; AB004750.1 gg_id:10039 Enterobacter aerogenes str. JCM1235 Bacteria Proteobacteria Gammaproteobacteria_SP Enterobacteriales_Enterobacteriaceae_CL Enterobacteriales_Enterobacteriaceae_OR Enterobacteriales_Enterobacteriaceae sfA 29441

Total number of rows: 24002

Table truncated, full table size 7946 Kbytes.




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