GEO help: Mouse over screen elements for information.
Status
Public on May 05, 2015
Title
Agilent-027438 Yeast S-Y SNP v1 [Probe Name Version]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Saccharomyces cerevisiae Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
Whole genome SNPs between S288c and YJM789. Both Watson and Crick strands represented as well as both probes specific to both strains.
Citation(s)
22267500 Submission date
May 04, 2015
Last update date
May 05, 2015
Contact name
Thomas D Petes
E-mail(s)
[email protected] Phone
919 684-4986
Organization name
Duke University School of Medicine
Department
Molecular Genetics and Microbiology
Lab
Petes
Street address
213 Research Drive
City
Durham
State/province
NC
ZIP/Postal code
27710
Country
USA
Samples (367)
GSM2079625 , GSM2079626 , GSM2079627 , GSM2079628 , GSM2079629 , GSM2079630
GSM2079631 ,
GSM2079632 ,
GSM2079633 ,
GSM2079634 ,
GSM2079635 ,
GSM2079636 ,
GSM2079637 ,
GSM2079638 ,
GSM2079639 ,
GSM2079640 ,
GSM2079641 ,
GSM2079642 ,
GSM2079643 ,
GSM2079644 ,
GSM2079645 ,
GSM2079646 ,
GSM2079647 ,
GSM2079648 ,
GSM2079649 ,
GSM2079650 ,
GSM2079651 ,
GSM2079652 ,
GSM2079653 ,
GSM2079654 ,
GSM2079655 ,
GSM2079656 ,
GSM2079657 ,
GSM2079658 ,
GSM2079659 ,
GSM2079660 ,
GSM2079661 ,
GSM2079662 ,
GSM2079663 ,
GSM2079664 ,
GSM2079665 ,
GSM2574914 ,
GSM2574915 ,
GSM2574916 ,
GSM2574917 ,
GSM2574918 ,
GSM2574919 ,
GSM2574920 ,
GSM2574921 ,
GSM2574922 ,
GSM2574923 ,
GSM2574924 ,
GSM2574925 ,
GSM2574926 ,
GSM2574927 ,
GSM2574928 ,
GSM2574929 ,
GSM2574930 ,
GSM2574931 ,
GSM2574932 ,
GSM2574933 ,
GSM2574934 ,
GSM2574935 ,
GSM2574936 ,
GSM2574937 ,
GSM2574938 ,
GSM2574939 ,
GSM2574940 ,
GSM2574941 ,
GSM2574942 ,
GSM2574943 ,
GSM2574944 ,
GSM2574945 ,
GSM2574946 ,
GSM2574947 ,
GSM2574948 ,
GSM2574949 ,
GSM2574950 ,
GSM2574951 ,
GSM2574952 ,
GSM2574953 ,
GSM2574954 ,
GSM2574955 ,
GSM2574956 ,
GSM2574957 ,
GSM2574958 ,
GSM2574959 ,
GSM2574960 ,
GSM2574961 ,
GSM2574962 ,
GSM2574963 ,
GSM2574964 ,
GSM2574965 ,
GSM2574966 ,
GSM2574967 ,
GSM2574968 ,
GSM2574969 ,
GSM2574970 ,
GSM2574971 ,
GSM2574972 ,
GSM2574973 ,
GSM2574974 ,
GSM2574975 ,
GSM2574976 ,
GSM2574977 ,
GSM2574978 ,
GSM2574979 ,
GSM2574980 ,
GSM2574981 ,
GSM2574982 ,
GSM2574983 ,
GSM2574984 ,
GSM2574985 ,
GSM2574986 ,
GSM2574987 ,
GSM2574988 ,
GSM2574989 ,
GSM2574990 ,
GSM2574991 ,
GSM2574992 ,
GSM2574993 ,
GSM2574994 ,
GSM2574995 ,
GSM2574996 ,
GSM2574997 ,
GSM2685127 ,
GSM2685128 ,
GSM2685129 ,
GSM2685130 ,
GSM2685131 ,
GSM2685132 ,
GSM2685133 ,
GSM2685134 ,
GSM2685135 ,
GSM2685136 ,
GSM2685137 ,
GSM2685138 ,
GSM2685139 ,
GSM2685140 ,
GSM2685141 ,
GSM2685142 ,
GSM2685143 ,
GSM2685144 ,
GSM2685145 ,
GSM2685146 ,
GSM2685147 ,
GSM2685148 ,
GSM2685149 ,
GSM2685150 ,
GSM2685151 ,
GSM2685152 ,
GSM2685153 ,
GSM2685154 ,
GSM2685155 ,
GSM2685156 ,
GSM2685157 ,
GSM2685158 ,
GSM2685159 ,
GSM2685160 ,
GSM2685161 ,
GSM2685162 ,
GSM2685163 ,
GSM2685164 ,
GSM2685165 ,
GSM2685166 ,
GSM2685167 ,
GSM2685168 ,
GSM2685169 ,
GSM2685170 ,
GSM2685171 ,
GSM2685172 ,
GSM2685173 ,
GSM2685174 ,
GSM2685175 ,
GSM2685176 ,
GSM2685177 ,
GSM2685178 ,
GSM2685179 ,
GSM2685180 ,
GSM2685181 ,
GSM2685182 ,
GSM2809333 ,
GSM2809334 ,
GSM2809335 ,
GSM2809336 ,
GSM2809337 ,
GSM2809338 ,
GSM2809339 ,
GSM2809340 ,
GSM2809341 ,
GSM2809342 ,
GSM2809343 ,
GSM2809344 ,
GSM2809345 ,
GSM2809346 ,
GSM2809347 ,
GSM2809348 ,
GSM2809349 ,
GSM2809350 ,
GSM2809351 ,
GSM2809352 ,
GSM2809353 ,
GSM2850680 ,
GSM2850681 ,
GSM2850682 ,
GSM2850683 ,
GSM2850684 ,
GSM2850685 ,
GSM2850686 ,
GSM2850687 ,
GSM2850688 ,
GSM2850689 ,
GSM2850690 ,
GSM2850691 ,
GSM2850692 ,
GSM2850693 ,
GSM2850694 ,
GSM2850695 ,
GSM2850696 ,
GSM2850697 ,
GSM2850698 ,
GSM2850699 ,
GSM2850700 ,
GSM2850701 ,
GSM2850702 ,
GSM2850703 ,
GSM2850704 ,
GSM2850705 ,
GSM2850706 ,
GSM2850707 ,
GSM2850708 ,
GSM2862218 ,
GSM2862219 ,
GSM2862220 ,
GSM2862221 ,
GSM2862222 ,
GSM2862223 ,
GSM2862224 ,
GSM2862225 ,
GSM2862226 ,
GSM2862227 ,
GSM2862228 ,
GSM2862229 ,
GSM2862230 ,
GSM2862231 ,
GSM2862232 ,
GSM2862233 ,
GSM2862234 ,
GSM2862235 ,
GSM2862236 ,
GSM2862237 ,
GSM2862238 ,
GSM2862239 ,
GSM2862240 ,
GSM2862241 ,
GSM2862242 ,
GSM2862243 ,
GSM2862244 ,
GSM2862245 ,
GSM2862246 ,
GSM2862247 ,
GSM3520748 ,
GSM3520749 ,
GSM3520750 ,
GSM3520751 ,
GSM3520752 ,
GSM3520753 ,
GSM3520754 ,
GSM3520755 ,
GSM3520756 ,
GSM3520757 ,
GSM3520758 ,
GSM3520759 ,
GSM3520760 ,
GSM3520761 ,
GSM3520762 ,
GSM3520763 ,
GSM3520764 ,
GSM3520765 ,
GSM3520766 ,
GSM3520767 ,
GSM3520768 ,
GSM3520769 ,
GSM3520770 ,
GSM3520771 ,
GSM3520772 ,
GSM3520773 ,
GSM3845552 ,
GSM3845553 ,
GSM3845554 ,
GSM3845555 ,
GSM3845556 ,
GSM3845557 ,
GSM3845558 ,
GSM3845559 ,
GSM3845560 ,
GSM3845561 ,
GSM3845562 ,
GSM3845563 ,
GSM3845564 ,
GSM3845565 ,
GSM4557182 ,
GSM4557183 ,
GSM4557184 ,
GSM4557185 ,
GSM4557186 ,
GSM4557187 ,
GSM4557188 ,
GSM4557189 ,
GSM4557190 ,
GSM4557191 ,
GSM4557192 ,
GSM4557193 ,
GSM4557194 ,
GSM4557195 ,
GSM4557196 ,
GSM4557197 ,
GSM4557198 ,
GSM4557199 ,
GSM4557200 ,
GSM4557201 ,
GSM4557202 ,
GSM5611745 ,
GSM5611746 ,
GSM5611747 ,
GSM5611748 ,
GSM5611749 ,
GSM5611750 ,
GSM5611751 ,
GSM5611752 ,
GSM5611753 ,
GSM5611754 ,
GSM5611755 ,
GSM5611756 ,
GSM5611757 ,
GSM5611758 ,
GSM5611759 ,
GSM5611760 ,
GSM5611761 ,
GSM5611762 ,
GSM5611763 ,
GSM5611764 ,
GSM5611765 ,
GSM5611766 ,
GSM5611767 ,
GSM5611768 ,
GSM5611769 ,
GSM5611770 ,
GSM5611771 ,
GSM6208438 ,
GSM6208439 ,
GSM6208440 ,
GSM6208441 ,
GSM6208442 ,
GSM6208443 ,
GSM6208444 ,
GSM6208445 ,
GSM6208446 ,
GSM6208447 ,
GSM6208448 ,
GSM6208449 ,
GSM6208450 ,
GSM6208451 ,
GSM6208452 ,
GSM6208453 ,
GSM6208454 ,
GSM6208455 Series (13)
GSE78856 Genomic instability induced by lowered expression of POL3 in yeast
GSE97667 Effectes of temperatures on meiotic recombination in S. cerevisiae
GSE100497 High-resolution mapping of heteroduplex DNA formed in UV-induced and spontaneous mitotic recombination events in yeast
GSE104879 Genomic instability induced by furfural-treated in S. cerevisiae [whole genome]
GSE104881 Genomic instability induced by furfural-treated in S. cerevisiae
GSE106816 Effects of oxidative stress on mitotic recombination and genomic stability in yeast
GSE107178 Effects of oxidative stress on mitotic recombination and genomic stability in yeast after 20 passages
GSE124107 Zeocin induced genomic instaiblity in yeast
GSE132128 Genomic instability induced by chronic exposure of furfural in yeast
GSE150711 Heat shock stimulates genomic instability and phenotypic variations in yeast
GSE185365 Global genomic instability caused by reduced expression of DNA polymerase ε in yeast [DZP2-derived isolates]
GSE185366 Global genomic instability caused by reduced expression of DNA polymerase ε in yeast
GSE205199 Shuffling the yeast genome using CRISPR/Cas9-generated DSBs that target the transposable Ty1 elements
Relations Alternative to
GPL20143 (Feature Number Version)
Data table header descriptions ID Agilent Probe Name
CONTROL_TYPE Control type
ACCESSION_STRING strain
CHROMOSOMAL_LOCATION Chromosomal Location
SEQUENCE SPOT_ID Spot identifier
Data table ID CONTROL_TYPE ACCESSION_STRING CHROMOSOMAL_LOCATION SEQUENCE SPOT_ID DarkCorner
pos
DarkCorner
chr1:101460YR
FALSE
YJM789
chr1:101460-101484
AGATGGAGCATATATACATGTTTTT
chr1:101460YR
chr12:815975SR
FALSE
s288c
chr12:815975-815999
GCTCGCAACTATCTAGCTAAATTAA
chr12:815975SR
chr10:122055YR
FALSE
YJM789
chr10:122055-122079
CCTTTAATATATACATTAGGACTGG
chr10:122055YR
chr12:301166SR
FALSE
s288c
chr12:301166-301190
GGATAAGCATGCACTAGAATATGTA
chr12:301166SR
chr4:127843YF
FALSE
YJM789
chr4:127843-127867
ATTACTCAAGTTCACGTGTAATGCG
chr4:127843YF
chr16:380791SR
FALSE
s288c
chr16:380791-380815
ATCAAATGTTAAAGGAATGAACCAG
chr16:380791SR
chr10:342462YF
FALSE
YJM789
chr10:342462-342486
CATTCCCTGCCCATATTTTAAGCAC
chr10:342462YF
chr4:971858SR
FALSE
s288c
chr4:971858-971882
GTGGTTAAAGATACTAAGCTTGTCG
chr4:971858SR
chr16:647706SF
FALSE
s288c
chr16:647706-647730
CAGGATCGAAAATTCAAAACAGCAT
chr16:647706SF
chr13:880223SF
FALSE
s288c
chr13:880223-880247
AAAACGCATAATGGAATGAAGACTT
chr13:880223SF
chr12:1020126YR
FALSE
YJM789
chr12:1020126-1020150
ATGTGACGATTGGAGAGCAAATAAA
chr12:1020126YR
chr1:99918SF
FALSE
s288c
chr1:99918-99942
ACCTTTACCTCAATAATCCCGTAAT
chr1:99918SF
chr13:708656YF
FALSE
YJM789
chr13:708656-708680
AACCAAATTAACAATGTTGAAGATT
chr13:708656YF
chr10:661351SF
FALSE
s288c
chr10:661351-661375
TATTTGTGCCTGGATTGAAATTGAT
chr10:661351SF
YF1254738
FALSE
YJM789
chr4:1254738-1254762
YF1254738
chr12:960122YR
FALSE
YJM789
chr12:960122-960146
AGAAATGGTGGGTTTTGTAAATTTT
chr12:960122YR
chr4:1058614SR
FALSE
s288c
chr4:1058614-1058638
CTTTTTGACTGTGCTTTCAACTTTT
chr4:1058614SR
chr4:1231783YF
FALSE
YJM789
chr4:1231783-1231807
CGCATAAATGGTGCATTTACAAGTT
chr4:1231783YF
chr3:236772YF
FALSE
YJM789
chr3:236772-236796
GGGTTTTTTTTTTCCTCTATAGCTG
chr3:236772YF
72401 5684 Kbytes .Supplementary data files not provided
Less...
More...