NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL2053 Query DataSets for GPL2053
Status Public on Jun 29, 2005
Title Human tiling array using Nimblegen platform, set 2 of 38
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer NimbleGen
 
Description High density oligonucleotide array of Nimblegen. 50mers designed for non-repetitive regions of human genome based on UCSC HG16. There are a total of 38 arrays. This is set 2.
Keywords = Nimblegen
Keywords = human tiling array
Keywords = LICR renlab
 
Web link http://www.nimblegen.com/
Contributor(s) Kim TH, Barrera LO, Zhang M, Qu C, Singer MA, Richmond TA, Wu Y, Green RD, Ren B
Submission date May 17, 2005
Last update date Oct 27, 2010
Contact name Chunxu Qu
E-mail(s) [email protected]
Phone (858)822-5767
Organization name Ludwig Institute for Cancer Research
Department Gene Regulation
Lab RenLab
Street address
City San Diego
State/province CA
ZIP/Postal code 92093
Country USA
 
Samples (1) GSM51749
Series (1)
GSE2672 A high-resolution map of active promoters in the human genome

Data table header descriptions
ID
Probe ID probe id
Chromosome chromosome
Position position
SEQUENCE probe sequence
Comment comment

Data table
ID Probe ID Chromosome Position SEQUENCE Comment
1 CHR01P078314323 CHR1 78314323 AATATGTGCTAGAAGCTTGTTCACTGTTAATAAGAATTCACTTTTAAATG SET02
2 CHR01P078314423 CHR1 78314423 ACCTACATTACAAGCATGAATTAAAAGTTAATATGGGTCTGAAGAAACAA SET02
3 CHR01P078314523 CHR1 78314523 TAAGTACACAAATAGGTTGCCAAACAGAAGTTTAAACTTCAAATACAAAT SET02
4 CHR01P078314623 CHR1 78314623 TTTTAGGAAGAAAAGACTGCAGAAAAGGGAAAAATGTTAGTTACTGGGCC SET02
5 CHR01P078314723 CHR1 78314723 AGTTGTTGCCTGGCTGTTTGTCCTAGCATCTAATTCTTCAGGGTTCTCCA SET02
6 CHR01P078314823 CHR1 78314823 TTGTATGGAAAGGAAAACAATAGGAACAATGACAATTAAATAACACCAGG SET02
7 CHR01P078314923 CHR1 78314923 GGCCAGGGGAAGATTTTTATTGTCTCCTCTGTGTATTTTTCTTCAGTTCC SET02
8 CHR01P078315023 CHR1 78315023 ATGCAGGATAGCCTTCTATCCTAAGTGTTTTAAATAAAATGGGCAATAAA SET02
9 CHR01P078315123 CHR1 78315123 CCACCTACTTTGCTTTATGAGATGTGGAAACTTTCAGAGCTGCCTCTGCT SET02
10 CHR01P078315223 CHR1 78315223 ATAACTAAATTCATTTGTTATGGTCTTTACAATAAGCTTTGCTGGTTTTG SET02
11 CHR01P078315323 CHR1 78315323 CACTTTATAATCATTTCTTAGTGATACAAGAGCTAATTGTAAAGAGGATG SET02
12 CHR01P078315423 CHR1 78315423 CGCACATTTTACTCTCTTTATGTAACAAGGGACTATATGTACTCCCACAT SET02
13 CHR01P078315523 CHR1 78315523 GTGCATTTAACTTAAAATATTTATTTAATTCTAAAATACCCATTAAATTA SET02
14 CHR01P078315783 CHR1 78315783 TGTATGACTATAAAACAGGATATGTTATAGATAATTGTCTGCTACACATG SET02
15 CHR01P078315883 CHR1 78315883 TAAACGAAATCTATTTCAAAAATAATTTATAGTTACTGGGAAGAGTATTT SET02
16 CHR01P078315983 CHR1 78315983 GAGCTCTGTGCTGCTGGCAAGCTGTTTTCCCACTGACAAGGTATTTCTAA SET02
17 CHR01P078316083 CHR1 78316083 GTAGAGAAATGAATGTAAAACTTATTTGGGAATTTTATGATCTGGTGATG SET02
18 CHR01P078316183 CHR1 78316183 TTGATCTGATAGAATGGTATGCTACACAGACAGAATGTGAGTGGAGTTTA SET02
19 CHR01P078316283 CHR1 78316283 TTATACATTTTGATGCAAACATTAGGGTAGGTGCACAAATATCAGTTGAA SET02
20 CHR01P078316383 CHR1 78316383 AAGAAGTTGAATCCTAACAATGTTGGAATGGAAAGAATTTTTTATCAGAG SET02

Total number of rows: 382520

Table truncated, full table size 35267 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap