NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL2079 Query DataSets for GPL2079
Status Public on Jun 29, 2005
Title Human tiling array using Nimblegen platform, set 28 of 38
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer NimbleGen
 
Description High density oligonucleotide array of Nimblegen. 50mers designed for non-repetitive regions of human genome based on UCSC HG16. There are a total of 38 arrays. This is set 28.
Keywords = Nimblegen
Keywords = human tiling array
Keywords = LICR renlab
 
Web link http://www.nimblegen.com/
Contributor(s) Kim TH, Barrera LO, Zhang M, Qu C, Singer MA, Richmond TA, Wu Y, Green RD, Ren B
Submission date May 17, 2005
Last update date Oct 27, 2010
Contact name Chunxu Qu
E-mail(s) [email protected]
Phone (858)822-5767
Organization name Ludwig Institute for Cancer Research
Department Gene Regulation
Lab RenLab
Street address
City San Diego
State/province CA
ZIP/Postal code 92093
Country USA
 
Samples (1) GSM51761
Series (1)
GSE2672 A high-resolution map of active promoters in the human genome

Data table header descriptions
ID
Probe ID probe id
Chromosome chromosome
Position position
SEQUENCE probe sequence
Comment comment

Data table
ID Probe ID Chromosome Position SEQUENCE Comment
1 CHR13P019430367 CHR13 19430367 TTTTAAAAAGTCAGTAAGAAATACTGTTCAGAAGTTTCACAAGATTTTAA SET28
2 CHR13P019430467 CHR13 19430467 TTTTCCAATACAAAAAAGAACACCTCTCCCCTAACCCCAGCTTCCCGAAA SET28
3 CHR13P019430567 CHR13 19430567 CACCCCTTGGTGGAGTTTAGGAGCCCAAGGCTGGCTATTTACAACATAGC SET28
4 CHR13P019430667 CHR13 19430667 AGAAAGCCCCTCCCACCAACCCTGTGATTTGCTAAGGAACATGTACAGCT SET28
5 CHR13P019430767 CHR13 19430767 CCTTCCAGTTCTATAATTCAATGATTCTAGTAATTCACCTTGGTAATTTT SET28
6 CHR13P019430867 CHR13 19430867 AAAGTTATTAAATGTTCACCAACTTATATTCAAAGGAATGCTGGTATATT SET28
7 CHR13P019430967 CHR13 19430967 TTTTGTGAGACACTGACTTGTTAATTACAGTTAAATAGACGTCATAAACA SET28
8 CHR13P019431067 CHR13 19431067 ACGGTTGTTACAGAAAAAAAAAAAACATACAAAGCAGCTTACCAAAAATA SET28
9 CHR13P019431167 CHR13 19431167 TTCCATGATTAAGGGAAGGCCCCTCATCTTCTAAGTTAAAATTTTAAGCA SET28
10 CHR13P019431267 CHR13 19431267 CAGTATATTTGTTTCTTATTAAAATACGGGCAAACTTTCCTTTAAAAATG SET28
11 CHR13P019431367 CHR13 19431367 AATTTTTTACCGGCCAAATGTATACTCTATGGCTTAGTAGTTAAGGTGAA SET28
12 CHR13P019431757 CHR13 19431757 AAAACACTCATATCCATCCTAGAGAAGCGTGAAAATGTAAAAGTTCTTGT SET28
13 CHR13P019432107 CHR13 19432107 TAACAACATTTTTGTCAAAAAAATCTGCAAGTTAAGTTCTTTCATGGTGA SET28
14 CHR13P019432207 CHR13 19432207 CGCCGAGCTAACTCGGGACCCTGTTACCGGCTGCTTGGCGCCCTGGTCGG SET28
15 CHR13P019432307 CHR13 19432307 AACCCTCGGGACACTGGAGACTTGCATTTCACAAACGGGTTTGCTCCAGG SET28
16 CHR13P019432407 CHR13 19432407 GAAGGATGTGATGGCAAGATGTGAATGATGTCAGAATCCCCATCTCCAGA SET28
17 CHR13P019432507 CHR13 19432507 AAACCCCCCACACGTCGCTAAACTAGGGCACGGGAATGGCGTGTTATGCA SET28
18 CHR13P019432607 CHR13 19432607 TCCCGCCAAGACCGTGAGCAAACTCGCAGAGTTGGCGCGGCAGCCGGCCG SET28
19 CHR13P019432769 CHR13 19432769 AACGGGGTGGGAACCGCGCGGCAGTGGGTGAGGCGGCGCAGCCACCGGGG SET28
20 CHR13P019432869 CHR13 19432869 TCGCGGGACGACGGGGCGGCCGGCGGGGGCCAACAGGGCGGGCTCTGAAG SET28

Total number of rows: 389199

Table truncated, full table size 36016 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap