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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Oct 02, 2015 |
| Title |
Illumina NextSeq 500 (Sus scrofa) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Sus scrofa |
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| Submission date |
Oct 02, 2015 |
| Last update date |
Oct 02, 2015 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (1376)
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GSM1900765, GSM1900766, GSM1900767, GSM2175102, GSM2175103, GSM2175104
GSM2175105, GSM2175106, GSM2175107, GSM2656152, GSM2656153, GSM2656154, GSM2656155, GSM2656156, GSM2656157, GSM2656158, GSM2656159, GSM2656160, GSM2656161, GSM2656162, GSM2656163, GSM2656164, GSM2656165, GSM2656166, GSM2656167, GSM2656168, GSM2656169, GSM2656170, GSM2786521, GSM2786522, GSM2786523, GSM2786524, GSM2786525, GSM2786526, GSM2786527, GSM2786528, GSM2786529, GSM2786530, GSM2786531, GSM2786532, GSM3138237, GSM3138238, GSM3138239, GSM3138240, GSM3138241, GSM3138242, GSM3140711, GSM3140712, GSM3140713, GSM3186858, GSM3186859, GSM3186860, GSM3186861, GSM3186862, GSM3186863, GSM3186864, GSM3186865, GSM3186866, GSM3186867, GSM3186868, GSM3186869, GSM3186870, GSM3186871, GSM3186872, GSM3186873, GSM3186874, GSM3186875, GSM3186876, GSM3186877, GSM3186878, GSM3186879, GSM3186880, GSM3186881, GSM3186882, GSM3186883, GSM3186884, GSM3186885, GSM3186886, GSM3186887, GSM3186888, GSM3186889, GSM3186890, GSM3186891, GSM3186892, GSM3186893, GSM3328093, GSM3328094, GSM3439928, GSM3453220, GSM3453221, GSM3453222, GSM3453223, GSM3453224, GSM3453225, GSM3595746, GSM3595747, GSM3595748, GSM3595749, GSM3619448, GSM3619449, GSM3619450, GSM3619451, GSM3619452, GSM3619453, GSM3619454, GSM3619455, GSM3619456, GSM3619457, GSM3619458, GSM3619459, GSM3619460, GSM3619461, GSM3619462, GSM3619463, GSM3619464, GSM3619465, GSM3619466, GSM3619467, GSM3619468, GSM3619469, GSM3619470, GSM3619471, GSM3619472, GSM3619473, GSM3619474, GSM3619475, GSM3619476, GSM3619477, GSM3619478, GSM3619479, GSM3619480, GSM3619481, GSM3619482, GSM3619483, GSM3689775, GSM3704202, GSM3704203, GSM3704204, GSM3704205, GSM3704206, GSM3704207, GSM3704208, GSM3704209, GSM3704210, GSM3704211, GSM3704212, GSM3704213, GSM3704214, GSM3704215, GSM3704216, GSM3704217, GSM3704218, GSM3704219, GSM3704220, GSM3704221, GSM3704222, GSM3704223, GSM3704224, GSM3704225, GSM3704226, GSM3704227, GSM3704228, GSM3704229, GSM3704230, GSM3704231, GSM3704232, GSM3704233, GSM3704234, GSM3704235, GSM3704236, GSM3704237, GSM3704238, GSM3704239, GSM3704240, GSM3704241, GSM3704242, GSM3704243, GSM3847571, GSM3847572, GSM3847573, GSM3847574, GSM3847575, GSM3847576, GSM3847577, GSM3847578, GSM3847579, GSM3847580, GSM3847581, GSM3847582, GSM3847583, GSM3847584, GSM3847585, GSM3847586, GSM3847587, GSM3847588, GSM3847589, GSM3847590, GSM3847591, GSM3847592, GSM3847593, GSM3847594, GSM3847595, GSM3847596, GSM3911327, GSM3911328, GSM3911329, GSM3911330, GSM3911331, GSM3911332, GSM3911333, GSM3911334, GSM3911335, GSM3911336, GSM3911337, GSM3911338, GSM3911339, GSM3911340, GSM3911341, GSM3911342, GSM3950752, GSM3950753, GSM3950754, GSM3950755, GSM3950756, GSM3950757, GSM3950758, GSM3950759, GSM3950760, GSM3950761, GSM4276224, GSM4276225, GSM4276226, GSM4276227, GSM4276228, GSM4276229, GSM4276230, GSM4276231, GSM4276232, GSM4276233, GSM4276234, GSM4276235, GSM4276236, GSM4276237, GSM4276238, GSM4276239, GSM4276240, GSM4276241, GSM4276242, GSM4276243, GSM4276244, GSM4276245, GSM4276246, GSM4276247, GSM4276248, GSM4276249, GSM4276250, GSM4276251, GSM4276252, GSM4276253, GSM4276254, GSM4276255, GSM4276256, GSM4276257, GSM4276258, GSM4276259, GSM4276260, GSM4299995, GSM4299996, GSM4299997, GSM4299998, GSM4299999, GSM4300000, GSM4300001, GSM4300002, GSM4300003, GSM4300004, GSM4300005, GSM4300006, GSM4300007, GSM4300008, GSM4300009, GSM4300010, GSM4300011, GSM4300012, GSM4300013, GSM4300014, GSM4300015, GSM4301352, GSM4301353, GSM4301354, GSM4301355, GSM4301356, GSM4301357, GSM4301358, GSM4301359, GSM4301360, GSM4301361, GSM4301362, GSM4301363, GSM4301364, GSM4301365, GSM4301366, GSM4301367, GSM4301368, GSM4301369, GSM4301370, GSM4301371, GSM4301372, GSM4301373, GSM4301374, GSM4301375, GSM4301376, GSM4301377, GSM4301378, GSM4301379, GSM4301380, GSM4301381, GSM4340121, GSM4340122, GSM4340123, GSM4340124, GSM4340125, GSM4340126, GSM4340127, GSM4340128, GSM4340129, GSM4340130, GSM4340131, GSM4340132, GSM4436609, GSM4436610, GSM4436611, GSM4436612, GSM4436613, GSM4436614, GSM4436615, GSM4436616, GSM4436617, GSM4436618, GSM4436619, GSM4436620, GSM4436621, GSM4436622, GSM4436623, GSM4436624, GSM4436625, GSM4436626, GSM4436627, GSM4436628, GSM4436629, GSM4436630, GSM4436631, GSM4436632, GSM4436633, GSM4436634, GSM4436635, GSM4436636, GSM4436637, GSM4436638, GSM4436639, GSM4436640, GSM4436641, GSM4436642, GSM4436643, GSM4436644, GSM4436645, GSM4436646, GSM4436647, GSM4436648, GSM4436649, GSM4436650, GSM4436651, GSM4436652, GSM4436653, GSM4436654, GSM4436655, GSM4436656, GSM4436657, GSM4436658, GSM4436659, GSM4436660, GSM4436661, GSM4436662, GSM4436663, GSM4436664, GSM4436665, GSM4436666, GSM4436667, GSM4436668, GSM4436669, GSM4436670, GSM4436671, GSM4436672, GSM4436673, GSM4436674, GSM4436675, GSM4436676, GSM4436677, GSM4436678, GSM4436679, GSM4436680, GSM4436681, GSM4436682, GSM4436683, GSM4436684, GSM4436685, GSM4436686, GSM4436687, GSM4436688, GSM4436689, GSM4436690, GSM4436691, GSM4436692, GSM4436693, GSM4436694, GSM4436695, GSM4436696, GSM4436697, GSM4436698, GSM4436699, GSM4436700, GSM4436701, GSM4436702, GSM4436703, GSM4436704, GSM4436705, GSM4436706, GSM4436707, GSM4436708, GSM4436709, GSM4436710, GSM4436711, GSM4436712, GSM4436713, GSM4436714, GSM4436715, GSM4436716, GSM4436717, GSM4436718, GSM4436719, GSM4436720, GSM4436721, GSM4436722, GSM4436723, GSM4436724, GSM4436725, GSM4436726, GSM4436727, GSM4436728, GSM4436729, GSM4436730, GSM4436731, GSM4436732, GSM4436733, GSM4436734, GSM4436735, GSM4436736, GSM4436737, GSM4436738, GSM4436739, GSM4436740, GSM4436741, GSM4436742, GSM4436743, GSM4436744, GSM4436745, GSM4436746, GSM4436747, GSM4436748, GSM4436749, GSM4436750, GSM4436751, GSM4436752, GSM4436753, GSM4436754, GSM4436755, GSM4436756, GSM4436757, GSM4436758, GSM4436759, GSM4436760, GSM4436761, GSM4436762, GSM4436763, GSM4436764, GSM4436765, GSM4436766, GSM4436767, GSM4436768, GSM4436769, GSM4436770, GSM4436771, GSM4436772, GSM4436773, GSM4436774, GSM4436775, GSM4436776, GSM4436777, GSM4436778, GSM4436779...
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| Series (58)
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| GSE73684 |
Subsets of visceral adipose tissue nuclei with discrete levels of 5-hydroxymethylcytosine |
| GSE81751 |
Regulatory networks in prenatal porcine skeletal muscle development under nutrient restriction |
| GSE99862 |
Early defects of airway mucin sialylation and of mucociliary clearance at the onset of lung pathogenesis in a pig model of cystic fibrosis |
| GSE103932 |
Zika virus infections of porcine fetal brain |
| GSE114229 |
Expression profile of mRNAs in PBMCs infected with CSF vaccine virus and Monocyte derived macrophages infected with virulent CSF virus of crossbred and indigenous pigs |
| GSE114377 |
Expression profile of miRNAs in PBMCs infected with CSF vaccine virus in six crossbred pigs |
| GSE115665 |
Early regenerative capacity in the porcine heart |
| GSE118409 |
Abundantly present miRNAs in milk-derived extracellular vesicles are conserved between mammals |
| GSE121600 |
Single-cell RNA-seq reveals novel cell differentiation dynamics during human airway epithelium regeneration |
| GSE122032 |
MiRNA expression profile in relation to oocyte developmental competence |
| GSE126291 |
Regulatory divergence during pig limb evolution |
| GSE126293 |
Regulatory divergence during limb evolution |
| GSE126989 |
Small RNA sequencing reveals new mode of action and potential biomarkers for the mycotoxin Zearalenone |
| GSE128992 |
Identification of renal resident macrophages across species [10X] |
| GSE128993 |
Identification of renal resident macrophages across species |
| GSE129300 |
A Western-type Dietary Pattern Induces an Atherogenic Gene Expression Profile in the Coronary Arteries of the Ossabaw Pig |
| GSE129301 |
A Western Dietary Pattern and Atorvastatin Induce Epicardial Adipose Tissue Interferon Signaling in the Ossabaw Pig |
| GSE132143 |
Single cell RNA-seq analysis reveals the crucial role of Collagen triple helix repeat containing 1 (Cthrc1) cardiac fibroblasts for ventricular remodeling after myocardial infarction [RNA-seq] |
| GSE132146 |
Single cell RNA-seq analysis reveals the crucial role of Collagen triple helix repeat containing 1 (Cthrc1) cardiac fibroblasts for ventricular remodeling after myocardial infarction |
| GSE133529 |
Transcatheter aortic valve replacements alter circulating serum factors to mediate myofibroblast deactivation |
| GSE134482 |
Sandwich cortical lamination and single-cell analysis decodes the developing spatial processing system |
| GSE143889 |
Molecular and genetic regulation of pig pancreatic islet cell development |
| GSE144883 |
Identifying the Key Regulators that Promote Cell-cycle Activity in the Hearts of Early Neonatal Pigs after Myocardial Injury |
| GSE144950 |
Hepatokine Fetuin-A disrupts functional maturation of pancreatic β-cells |
| GSE145954 |
Whole Transcriptome analysis for porcine alveolar macrophage infected by African Swine Fever Virus |
| GSE147632 |
Distinctive cellular and metabolic reprogramming in porcine lung myeloid cells infected with type I PRRSV strains |
| GSE154119 |
A Single Neuron Scale Molecular Phenotype Map of the Right Atrial Ganglionic Plexus in the Pig Heart |
| GSE154411 |
A spatially-tracked single cell transcriptomics map of neuronal networks in the intrinsic cardiac nervous system |
| GSE159583 |
Exploring with transcriptomic approaches the underlying mechanisms of essential oils-based phytogenic in the small intestine and liver of pigs |
| GSE160426 |
Western and Heart Healthy Dietary Patterns Differentially Affect the Expression of Genes Associated with Lipid Metabolism, Interferon Signaling and Inflammation in the Jejunum of Ossabaw Pigs |
| GSE163159 |
Colon Transcriptome is Modified by a Dietary Pattern/Atorvastatin Interaction in the Ossabaw Pig |
| GSE166561 |
Isolating and Cryo-Preserving Pig Skin Cells for Single Cell RNA Sequencing Study |
| GSE166656 |
Repetitive in vivo manual loading of the spine elicits cellular responses in porcine annuli fibrosi |
| GSE167892 |
Nuclear mechanosensing drives chromatin remodeling of persistently activated myofibroblasts |
| GSE173768 |
Airway administration of flagellin regulates the inflammatory response to Pseudomonas aeruginosa |
| GSE174817 |
Genes that escape X chromosome inactivation modulate sex differences in valve myofibroblasts |
| GSE185289 |
Single nucleus transcriptomics: Apical resection in newborn pigs extends the time-window of cardiomyocyte proliferation and myocardial regeneration |
| GSE197106 |
Comparative transcriptomics reveal highly conserved regional programs between porcine and human colonic enteric nervous system |
| GSE197184 |
Cystic fibrosis causes olfactory system defects by altering progenitor cell proliferation (Bulk RNA-Seq) |
| GSE197187 |
Cystic fibrosis causes olfactory system defects by altering progenitor cell proliferation |
| GSE197189 |
Cystic fibrosis causes olfactory system defects by altering progenitor cell proliferation (scRNA-Seq) |
| GSE201012 |
Alphaherpesviruses remodel the cellular transcriptome to deplete m6A-containing transcripts |
| GSE212533 |
Enteric Glial Cell Network Function is Required for Epithelial Barrier Restitution following Intestinal Ischemic Injury in the Early Postnatal Period |
| GSE216865 |
Transcriptome Profiling of PRRSV Infected Porcine Alveolar Macrophages By Single Cell Sequencing |
| GSE218650 |
Transgenic porcine model reveals two roles for LGR5 during lung development and homeostasis [scRNA-seq] |
| GSE218658 |
Transgenic porcine model reveals two roles for LGR5 during lung development and homeostasis |
| GSE220297 |
Single-cell transcriptomic analysis reveals transcriptional and cell subpopulation differences between human and pig immune cells |
| GSE229497 |
Comparative transcriptomics of porcine conventional blood NK cells, conventional liver NK cells and liver resident NK cells |
| GSE233177 |
RNAseq analysis on liver from pigs treated with testosterone and nandrolone esters: identification and field validation of transcriptional biomarkers |
| GSE235087 |
Dynamic changes in the transcriptome of tRNA-derived small RNAs related with fat metabolism I |
| GSE236766 |
A single-cell atlas of pig gastrulation as a resource for comparative embryology |
| GSE237026 |
RNA-sequencing of pig oocyte throughout meiotic maturation |
| GSE240012 |
A comparison between GalT-/-;hCD39;hCD55 and GalT-/-;hCD39;hCD46;hCD55;TBM pig kidney transplanted in non-human primates |
| GSE241921 |
Ex vivo lung perfusion with dialysis in pig (timepoints T0H, T6H and T12H) |
| GSE242074 |
Longitudinal dynamics of circulating miRNAs in a swine model of familial hypercholesterolemia during early atherosclerosis |
| GSE244507 |
Early to Sustained Impacts of Lethal Radiation on Circulating miRNAs in a Minipig Model |
| GSE252125 |
Integrated transcriptomics and proteomics analysis reveals muscle metabolism effects of dietary Ulva lactuca and ulvan lyase supplementation in weaned piglets |
| GSE267742 |
miRNA profiles in muscle of IUGR and normal weight pig fetuses |
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| Supplementary data files not provided |
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