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Platform GPL23196 Query DataSets for GPL23196
Status Public on Mar 22, 2017
Title Agilent-072445 ArrayXS_S.gallolyticus_01-2015 [gene version]
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Streptococcus gallolyticus subsp. gallolyticus
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
Description exp. val. 8x15K design for the S. gallolyticus strains UCN34, DSM 16831, ATCC BAA2069 and ATCC 43143, annotation preferentially based on ATCC BAA-2069
Arrays of this design have barcodes that begin with 16072445 or 2572445.
Probe sequences are available in the file GPL23196_072445_D_GEO_20150113.txt.gz located at the foot of this page.
 
Submission date Mar 20, 2017
Last update date May 16, 2017
Contact name Imke Grimm
E-mail(s) [email protected]
Organization name Herz- und Diabeteszentrum NRW; Universitätsklinikum der Ruhr-Universität Bochum
Department Institut für Laboratoriums- und Transfusionsmedizin
Street address Georgstraße 11
City Bad Oeynhausen
ZIP/Postal code 32545
Country Germany
 
Samples (48) GSM2544657, GSM2544658, GSM2544659, GSM2544660, GSM2544661, GSM2544662 
Series (10)
GSE96822 Transcriptome analysis of Streptococcus gallolyticus subsp. gallolyticus in interaction with THP-1 macrophages [BAA-2069 0h]
GSE96823 Transcriptome analysis of Streptococcus gallolyticus subsp. gallolyticus in interaction with THP-1 macrophages [BAA-2069 5h]
GSE96861 Transcriptome analysis of Streptococcus gallolyticus subsp. gallolyticus in interaction with THP-1 macrophages [UCN 34 0h]

Data table header descriptions
ID
GENE_SYMBOL
GENOME_ACC
DESCRIPTION
SPOT_ID

Data table
ID GENE_SYMBOL GENOME_ACC DESCRIPTION SPOT_ID
NC_013798.1_Locc1009511T1007586 NC_013798.1 transcriptional regulator-antiterminator NC_013798.1_Locc1009511T1007586
SGGDSM16831_06015 phosphate transporter ATP-binding protein Location [1254488:1255292] strand -1 SGGDSM16831_06015
NC_013798.1_Loc288112T288873 NC_013798.1 transposon related peptidoglycan linked protein (LPXTG motif) NC_013798.1_Loc288112T288873
NC_015215.1_Loc228899T230509 dexB NC_015215.1 glucan 1,6-alpha-glucosidase NC_015215.1_Loc228899T230509
NC_015215.1_Loc846153T846803 nth NC_015215.1 endonuclease III NC_015215.1_Loc846153T846803
SGGDSM16831_11055 V-type ATP synthase subunit F Location [2272236:2272557] strand -1 SGGDSM16831_11055
NC_013798.1_Loc1470713T1472080 NC_013798.1 maltose/maltodextrin ABC transporter permease MalF NC_013798.1_Loc1470713T1472080
NC_013798.1_Loc644940T645080 NC_013798.1 hypothetical protein NC_013798.1_Loc644940T645080
NC_015215.1_Locc1252744T1251239 pbg3 NC_015215.1 6-phospho-beta-glucosidase NC_015215.1_Locc1252744T1251239
NC_013798.1_Loc870712T871326 NC_013798.1 TetR family transcriptional regulator NC_013798.1_Loc870712T871326
NC_013798.1_Locc1339063T1338107 NC_013798.1 hypothetical protein NC_013798.1_Locc1339063T1338107
NC_015215.1_Loc1613627T1613950 NC_015215.1 hypothetical protein NC_015215.1_Loc1613627T1613950
NC_015215.1_Locc1987242T1986724 rpiB NC_015215.1 ribose 5-phosphate isomerase B NC_015215.1_Locc1987242T1986724
NC_015215.1_Loc649252T649968 rluB NC_015215.1 ribosomal small subunit pseudouridine synthase A NC_015215.1_Loc649252T649968
SGGDSM16831_07720 Cro/CI family transcriptional regulator Location [1593537:1593762] strand -1 SGGDSM16831_07720
NC_015215.1_Locc1693182T1692229 NC_015215.1 aldo/keto reductase NC_015215.1_Locc1693182T1692229
NC_015215.1_Locc1883880T1883332 pncA NC_015215.1 putative pyrazinamidase/nicotinamidase (isochorismate synthase) NC_015215.1_Locc1883880T1883332
NC_017576.1_Locc2213590T2212766 NC_017576.1 hypothetical protein NC_017576.1_Locc2213590T2212766
NC_013798.1_Loc371309T371797 accB NC_013798.1 acetyl-CoA carboxylase NC_013798.1_Loc371309T371797
NC_013798.1_Loc591042T591776 NC_013798.1 hypothetical protein NC_013798.1_Loc591042T591776

Total number of rows: 4382

Table truncated, full table size 451 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL23196_072445_D_GEO_20150113.txt.gz 821.3 Kb (ftp)(http) TXT

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