 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Mar 27, 2020 |
| Title |
NanoString nCounter Human miRGE Expression Assay Custom CodeSet [WHEL] |
| Technology type |
other |
| Distribution |
custom-commercial |
| Organism |
Homo sapiens |
| Manufacturer |
NanoString Technologies, Inc. |
| Manufacture protocol |
https://www.nanostring.com/products/mirna-assays/mirge-assay
|
| |
|
| |
|
| Submission date |
Mar 17, 2020 |
| Last update date |
Mar 27, 2020 |
| Contact name |
Loki Natarajan |
| E-mail(s) |
[email protected]
|
| Organization name |
University of California, San Diego
|
| Street address |
3855 Health Sciences DR
|
| City |
La Jolla |
| ZIP/Postal code |
92093-0901 |
| Country |
USA |
| |
|
| Samples (1253)
|
GSM4417738, GSM4417739, GSM4417740, GSM4417741, GSM4417742, GSM4417743
GSM4417744, GSM4417745, GSM4417746, GSM4417747, GSM4417748, GSM4417749, GSM4417750, GSM4417751, GSM4417752, GSM4417753, GSM4417754, GSM4417755, GSM4417756, GSM4417757, GSM4417758, GSM4417759, GSM4417760, GSM4417761, GSM4417762, GSM4417763, GSM4417764, GSM4417765, GSM4417766, GSM4417767, GSM4417768, GSM4417769, GSM4417770, GSM4417771, GSM4417772, GSM4417773, GSM4417774, GSM4417775, GSM4417776, GSM4417777, GSM4417778, GSM4417779, GSM4417780, GSM4417781, GSM4417782, GSM4417783, GSM4417784, GSM4417785, GSM4417786, GSM4417787, GSM4417788, GSM4417789, GSM4417790, GSM4417791, GSM4417792, GSM4417793, GSM4417794, GSM4417795, GSM4417796, GSM4417797, GSM4417798, GSM4417799, GSM4417800, GSM4417801, GSM4417802, GSM4417803, GSM4417804, GSM4417805, GSM4417806, GSM4417807, GSM4417808, GSM4417809, GSM4417810, GSM4417811, GSM4417812, GSM4417813, GSM4417814, GSM4417815, GSM4417816, GSM4417817, GSM4417818, GSM4417819, GSM4417820, GSM4417821, GSM4417822, GSM4417823, GSM4417824, GSM4417825, GSM4417826, GSM4417827, GSM4417828, GSM4417829, GSM4417830, GSM4417831, GSM4417832, GSM4417833, GSM4417834, GSM4417835, GSM4417836, GSM4417837, GSM4417838, GSM4417839, GSM4417840, GSM4417841, GSM4417842, GSM4417843, GSM4417844, GSM4417845, GSM4417846, GSM4417847, GSM4417848, GSM4417849, GSM4417850, GSM4417851, GSM4417852, GSM4417853, GSM4417854, GSM4417855, GSM4417856, GSM4417857, GSM4417858, GSM4417859, GSM4417860, GSM4417861, GSM4417862, GSM4417863, GSM4417864, GSM4417865, GSM4417866, GSM4417867, GSM4417868, GSM4417869, GSM4417870, GSM4417871, GSM4417872, GSM4417873, GSM4417874, GSM4417875, GSM4417876, GSM4417877, GSM4417878, GSM4417879, GSM4417880, GSM4417881, GSM4417882, GSM4417883, GSM4417884, GSM4417885, GSM4417886, GSM4417887, GSM4417888, GSM4417889, GSM4417890, GSM4417891, GSM4417892, GSM4417893, GSM4417894, GSM4417895, GSM4417896, GSM4417897, GSM4417898, GSM4417899, GSM4417900, GSM4417901, GSM4417902, GSM4417903, GSM4417904, GSM4417905, GSM4417906, GSM4417907, GSM4417908, GSM4417909, GSM4417910, GSM4417911, GSM4417912, GSM4417913, GSM4417914, GSM4417915, GSM4417916, GSM4417917, GSM4417918, GSM4417919, GSM4417920, GSM4417921, GSM4417922, GSM4417923, GSM4417924, GSM4417925, GSM4417926, GSM4417927, GSM4417928, GSM4417929, GSM4417930, GSM4417931, GSM4417932, GSM4417933, GSM4417934, GSM4417935, GSM4417936, GSM4417937, GSM4417938, GSM4417939, GSM4417940, GSM4417941, GSM4417942, GSM4417943, GSM4417944, GSM4417945, GSM4417946, GSM4417947, GSM4417948, GSM4417949, GSM4417950, GSM4417951, GSM4417952, GSM4417953, GSM4417954, GSM4417955, GSM4417956, GSM4417957, GSM4417958, GSM4417959, GSM4417960, GSM4417961, GSM4417962, GSM4417963, GSM4417964, GSM4417965, GSM4417966, GSM4417967, GSM4417968, GSM4417969, GSM4417970, GSM4417971, GSM4417972, GSM4417973, GSM4417974, GSM4417975, GSM4417976, GSM4417977, GSM4417978, GSM4417979, GSM4417980, GSM4417981, GSM4417982, GSM4417983, GSM4417984, GSM4417985, GSM4417986, GSM4417987, GSM4417988, GSM4417989, GSM4417990, GSM4417991, GSM4417992, GSM4417993, GSM4417994, GSM4417995, GSM4417996, GSM4417997, GSM4417998, GSM4417999, GSM4418000, GSM4418001, GSM4418002, GSM4418003, GSM4418004, GSM4418005, GSM4418006, GSM4418007, GSM4418008, GSM4418009, GSM4418010, GSM4418011, GSM4418012, GSM4418013, GSM4418014, GSM4418015, GSM4418016, GSM4418017, GSM4418018, GSM4418019, GSM4418020, GSM4418021, GSM4418022, GSM4418023, GSM4418024, GSM4418025, GSM4418026, GSM4418027, GSM4418028, GSM4418029, GSM4418030, GSM4418031, GSM4418032, GSM4418033, GSM4418034, GSM4418035, GSM4418036, GSM4418037, GSM4418038, GSM4418039, GSM4418040, GSM4418041, GSM4418042, GSM4418043, GSM4418044, GSM4418045, GSM4418046, GSM4418047, GSM4418048, GSM4418049, GSM4418050, GSM4418051, GSM4418052, GSM4418053, GSM4418054, GSM4418055, GSM4418056, GSM4418057, GSM4418058, GSM4418059, GSM4418060, GSM4418061, GSM4418062, GSM4418063, GSM4418064, GSM4418065, GSM4418066, GSM4418067, GSM4418068, GSM4418069, GSM4418070, GSM4418071, GSM4418072, GSM4418073, GSM4418074, GSM4418075, GSM4418076, GSM4418077, GSM4418078, GSM4418079, GSM4418080, GSM4418081, GSM4418082, GSM4418083, GSM4418084, GSM4418085, GSM4418086, GSM4418087, GSM4418088, GSM4418089, GSM4418090, GSM4418091, GSM4418092, GSM4418093, GSM4418094, GSM4418095, GSM4418096, GSM4418097, GSM4418098, GSM4418099, GSM4418100, GSM4418101, GSM4418102, GSM4418103, GSM4418104, GSM4418105, GSM4418106, GSM4418107, GSM4418108, GSM4418109, GSM4418110, GSM4418111, GSM4418112, GSM4418113, GSM4418114, GSM4418115, GSM4418116, GSM4418117, GSM4418118, GSM4418119, GSM4418120, GSM4418121, GSM4418122, GSM4418123, GSM4418124, GSM4418125, GSM4418126, GSM4418127, GSM4418128, GSM4418129, GSM4418130, GSM4418131, GSM4418132, GSM4418133, GSM4418134, GSM4418135, GSM4418136, GSM4418137, GSM4418138, GSM4418139, GSM4418140, GSM4418141, GSM4418142, GSM4418143, GSM4418144, GSM4418145, GSM4418146, GSM4418147, GSM4418148, GSM4418149, GSM4418150, GSM4418151, GSM4418152, GSM4418153, GSM4418154, GSM4418155, GSM4418156, GSM4418157, GSM4418158, GSM4418159, GSM4418160, GSM4418161, GSM4418162, GSM4418163, GSM4418164, GSM4418165, GSM4418166, GSM4418167, GSM4418168, GSM4418169, GSM4418170, GSM4418171, GSM4418172, GSM4418173, GSM4418174, GSM4418175, GSM4418176, GSM4418177, GSM4418178, GSM4418179, GSM4418180, GSM4418181, GSM4418182, GSM4418183, GSM4418184, GSM4418185, GSM4418186, GSM4418187, GSM4418188, GSM4418189, GSM4418190, GSM4418191, GSM4418192, GSM4418193, GSM4418194, GSM4418195, GSM4418196, GSM4418197, GSM4418198, GSM4418199, GSM4418200, GSM4418201, GSM4418202, GSM4418203, GSM4418204, GSM4418205, GSM4418206, GSM4418207, GSM4418208, GSM4418209, GSM4418210, GSM4418211, GSM4418212, GSM4418213, GSM4418214, GSM4418215, GSM4418216, GSM4418217, GSM4418218, GSM4418219, GSM4418220, GSM4418221, GSM4418222, GSM4418223, GSM4418224, GSM4418225, GSM4418226, GSM4418227, GSM4418228, GSM4418229, GSM4418230, GSM4418231, GSM4418232, GSM4418233, GSM4418234, GSM4418235, GSM4418236, GSM4418237...
Accession list truncated, click here to browse through all related public accessions
You can also download a list of all accessions here
|
| Series (1) |
| GSE147126 |
mRNAs and miRNAs for Women's Healthy Eating and Living (WHEL) Study |
|
| Data table header descriptions |
| ID |
|
| CodeClass |
nCounter classification: positive control (Positive1 for mRNAs and Positive2 for miRNAs), negative control, or endogenous transcript |
| Name |
Name of the mRNA or miRNA target; NanoString ID (positive/negative controls) |
| Accession |
|
| Targeted Region |
Location of the target sequence within the transcript |
| SEQUENCE |
Sequence of the mRNA or miRNA transcript targeted for hybridization of the CodeSet Capture and Reporter probes |
| Data table |
| ID |
CodeClass |
Name |
Accession |
Targeted Region |
SEQUENCE |
| ACOT7 |
Endogenous1 |
ACOT7 |
NM_007274.3 |
1702-1801 |
GAGCGCCGGGAGGCGTTGGGCAGAAACCCTCGGGAATGCTTCCGAGCACGCTGTAGGGTATGGGAAGAACCCAGCACCACTAATAAAGCTGCTGCTTGGC |
| ACTB |
Endogenous1 |
ACTB |
NM_001101.2 |
1686-1785 |
CCAACTTGAGATGTATGAAGGCTTTTGGTCTCCCTGGGAGTGGGTGGAGGCAGCCAGGGCTTACCTGTACACTGACTTGAGACCAGTTGAATAAAAGTGC |
| ACTR3B |
Endogenous1 |
ACTR3B |
NM_001040135.1 |
906-1005 |
CCAGAAGAAGTTTGTTATAGACGTTGGTTACGAAAGATTCCTGGGACCTGAAATATTCTTTCACCCGGAGTTTGCCAACCCAGACTTTATGGAGTCCATC |
| ADM |
Endogenous1 |
ADM |
NM_001124.1 |
1301-1400 |
GCGAGGTGTAAAGTTGTTCGCCGCGTGGAATGTGAGTGTGTTTGTGTGCATGAAAGAGAAAGACTGATTACCTCCTGTGTGGAAGAAGGAAACACCGAGT |
| ALDOA |
Endogenous1 |
ALDOA |
NM_184041.2 |
1456-1555 |
AGGCTGGCTTGCCCGCGCTCTTTCTTCCCTCGTGACAGTGGTGTGTGGTGTCGTCTGTGAATGCTAAGTCCATCACCCTTTCCGGCACACTGCCAAATAA |
| ANGPTL4 |
Endogenous1 |
ANGPTL4 |
NM_001039667.1 |
1137-1236 |
CACCTGCAGCCATTCCAACCTCAACGGCCAGTACTTCCGCTCCATCCCACAGCAGCGGCAGAAGCTTAAGAAGGGAATCTTCTGGAAGACCTGGCGGGGC |
| ANLN |
Endogenous1 |
ANLN |
NM_018685.2 |
241-340 |
CGTGCCAGGCGAGAGAATCTTCAGAGAAAAATGGCTGAGAGGCCCACAGCAGCTCCAAGGTCTATGACTCATGCTAAGCGAGCTAGACAGCCACTTTCAG |
| AURKA |
Endogenous1 |
AURKA |
NM_198433.1 |
311-410 |
AGGCGCCCTGTAGGATACTGCTTGTTACTTATTACAGCTAGAGGGTCTCACTCCATTGCCCAGGCCAGAGTGCGGGGATATTTGATAAGAAACTTCAGTG |
| AXL |
Endogenous1 |
AXL |
NM_001699.4 |
1898-1997 |
CTGGAGGATTTCCTGAGTGAAGCGGTCTGCATGAAGGAATTTGACCATCCCAACGTCATGAGGCTCATCGGTGTCTGTTTCCAGGGTTCTGAACGAGAGA |
| B2M |
Endogenous1 |
B2M |
NM_004048.2 |
26-125 |
CGGGCATTCCTGAAGCTGACAGCATTCGGGCCGAGATGTCTCGCTCCGTGGCCTTAGCTGTGCTCGCGCTACTCTCTCTTTCTGGCCTGGAGGCTATCCA |
| BAG1 |
Endogenous1 |
BAG1 |
NM_004323.3 |
541-640 |
CTTCATGTTACCTCCCAGCAGGGCAGCAGTGAACCAGTTGTCCAAGACCTGGCCCAGGTTGTTGAAGAGGTCATAGGGGTTCCACAGTCTTTTCAGAAAC |
| BCL2 |
Endogenous1 |
BCL2 |
NM_000633.2 |
1526-1625 |
CCAAGCACCGCTTCGTGTGGCTCCACCTGGATGTTCTGTGCCTGTAAACATAGATTCGCTTTCCATGTTGTTGGCCGGATCACCATCTGAAGAGCAGACG |
| BIRC5 |
Endogenous1 |
BIRC5 |
NM_001168.2 |
1216-1315 |
CCATTCTAAGTCATTGGGGAAACGGGGTGAACTTCAGGTGGATGAGGAGACAGAATAGAGTGATAGGAAGCGTCTGGCAGATACTCCTTTTGCCACTGCT |
| BLVRA |
Endogenous1 |
BLVRA |
NM_000712.3 |
486-585 |
TTCCTGAAAAAAGAAGTGGTGGGGAAAGACCTGCTGAAAGGGTCGCTCCTCTTCACAGCTGGCCCGTTGGAAGAAGAGCGGTTTGGCTTCCCTGCATTCA |
| CAV1 |
Endogenous1 |
CAV1 |
NM_001753.3 |
435-534 |
AACCGCGACCCTAAACACCTCAACGATGACGTGGTCAAGATTGACTTTGAAGATGTGATTGCAGAACCAGAAGGGACACACAGTTTTGACGGCATTTGGA |
| CCNB1 |
Endogenous1 |
CCNB1 |
NM_031966.2 |
711-810 |
GAGACAACTTGAGGAAGAGCAAGCAGTCAGACCAAAATACCTACTGGGTCGGGAAGTCACTGGAAACATGAGAGCCATCCTAATTGACTGGCTAGTACAG |
| CCNE1 |
Endogenous1 |
CCNE1 |
NM_001238.1 |
1156-1255 |
GAGAACTGTGTCAAGTGGATGGTTCCATTTGCCATGGTTATAAGGGAGACGGGGAGCTCAAAACTGAAGCACTTCAGGGGCGTCGCTGATGAAGATGCAC |
| CD24 |
Endogenous1 |
CD24 |
NM_013230.2 |
96-195 |
ACCGACGGAGGGGACATGGGCAGAGCAATGGTGGCCAGGCTCGGGCTGGGGCTGCTGCTGCTGGCACTGCTCCTACCCACGCAGATTTATTCCAGTGAAA |
| CD68 |
Endogenous1 |
CD68 |
NM_001251.2 |
1141-1240 |
ACCGGTCCATCTTGCTGCCTCTCATCATCGGCCTGATCCTTCTTGGCCTCCTCGCCCTGGTGCTTATTGCTTTCTGCATCATCCGGAGACGCCCATCCGC |
| CDC20 |
Endogenous1 |
CDC20 |
NM_001255.1 |
916-1015 |
CCCGAGTGGGCTCCCTAAGCTGGAACAGCTATATCCTGTCCAGTGGTTCACGTTCTGGCCACATCCACCACCATGATGTTCGGGTAGCAGAACACCATGT |
Total number of rows: 164
Table truncated, full table size 20 Kbytes.
| Supplementary data files not provided |
|
|
|
|
 |
Less...
More...