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| Status |
Public on Oct 07, 2003 |
| Title |
MWG Streptococcus pneumoniae Array |
| Technology type |
spotted oligonucleotide |
| Distribution |
commercial |
| Organism |
Streptococcus pneumoniae |
| Manufacturer |
MWG Biotech |
| Manufacture protocol |
see manufacturer's web site
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| Description |
The MWG S. pneumoniae Array contains 2018 oligonucleotide probes covering the whole S. pneumoniae transcriptome.
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| Web link |
http://ecom2.mwgdna.com/services/array/download
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| Submission date |
Oct 07, 2003 |
| Last update date |
May 31, 2005 |
| Organization |
MWG Biotech |
| E-mail(s) |
[email protected]
|
| Phone |
1-877-MWG-BTEC
|
| Fax |
1-336-812-9983
|
| Street address |
4170 Mendenhall Oaks Parkway, Suite 160
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| City |
High Point |
| State/province |
NC |
| ZIP/Postal code |
27265 |
| Country |
USA |
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| Samples (71)
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GSM122721, GSM122722, GSM122723, GSM122724, GSM122725, GSM122726
GSM170691, GSM170747, GSM170750, GSM170751, GSM170752, GSM170753, GSM235031, GSM235078, GSM235341, GSM324175, GSM324178, GSM324179, GSM324181, GSM364121, GSM364124, GSM364127, GSM364132, GSM364134, GSM364137, GSM364171, GSM364173, GSM364174, GSM364175, GSM364176, GSM364177, GSM365389, GSM365394, GSM365395, GSM493217, GSM493237, GSM493238, GSM494341, GSM494342, GSM494343, GSM537311, GSM537312, GSM537313, GSM573256, GSM573257, GSM573258, GSM573259, GSM573260, GSM573261, GSM573262, GSM573263, GSM573264, GSM573265, GSM573266, GSM573267, GSM573268, GSM573269, GSM573270, GSM573271, GSM573272, GSM573273, GSM575734, GSM575735, GSM575736, GSM575737, GSM575738, GSM575739, GSM575740, GSM575741, GSM575742, GSM957586
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| Series (12)
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| GSE5375 |
Global transcription pattern of virulent S. pneumoniae strain D39 (NCTC) compared to that of strains R6 and D39 (Lilly) |
| GSE7109 |
Cis- and trans-Regulation of Pneumococcal spxB |
| GSE9284 |
Polymorphism and Regulation of the spxB (Pyruvate Oxidase) Virulence Factor Gene in Streptococcus pneumoniae |
| GSE13107 |
Capsule Mediates the Cell Shape of pcsB Mutants in Serotype 2 Streptococcus pneumoniae |
| GSE14688 |
Identification and function of non-coding small RNAs in Streptococcus pneumoniae |
| GSE14750 |
Roles of relSpn in Stringent Response, Global Regulation, and Virulence of Serotype 2 Streptococcus pneumoniae D39 |
| GSE19752 |
Conditional Essentiality of vicK (walKSpn) Histidine Kinase for Anaerobic Growth of Streptococcus pneumoniae D39 |
| GSE19791 |
Aerobic and Anaerobic Growth of Streptococcus pneumoniae D39 |
| GSE21506 |
The metalloregulatory site in Streptococcus pneumoniae AdcR, a zinc-activated MarR-family repressor |
| GSE23404 |
Instability of Acetate Kinase Mutants and Their Effects on Acetyl Phosphate and ATP Amounts in Streptococcus pneumoniae |
| GSE23504 |
Interplay between manganese and zinc homeostasis in the human pathogen Streptococcus pneumoniae |
| GSE39176 |
A new structural paradigm in copper resistance in a human pathogen |
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| Data table header descriptions |
| ID |
|
| metarow |
number of subarray row |
| metacolumn |
number of subarray column |
| row |
number of row within subarray |
| column |
number of column within subarray |
| oligo |
mwg oligo id |
| CLONE_ID |
gene or locus id |
| function |
gene function |
| Data table |
| ID |
metarow |
metacolumn |
row |
column |
oligo |
CLONE_ID |
function |
| 1.1.1.1 |
1 |
1 |
1 |
1 |
mwgspr#1760 |
spr1760 |
Conserved hypothetical protein |
| 1.1.1.2 |
1 |
1 |
1 |
2 |
mwgspr#1275 |
spr1275 |
Conserved hypothetical protein |
| 1.1.1.3 |
1 |
1 |
1 |
3 |
mwgspr#0357 |
spr0357 |
Conserved hypothetical protein |
| 1.1.1.4 |
1 |
1 |
1 |
4 |
mwgspr#0380 |
spr0380 |
fabd; Malonyl acyl carrier protein transacylase |
| 1.1.1.5 |
1 |
1 |
1 |
5 |
mwgaracontrol#017-01 |
mwgaracontrol#017-01 |
Arabidopsis Control Oligo |
| 1.1.1.6 |
1 |
1 |
1 |
6 |
mwgspr#1186 |
spr1186 |
npl-truncation; N-acetylneuraminate lyase subunit, truncation |
| 1.1.1.7 |
1 |
1 |
1 |
7 |
mwgspr#1421 |
spr1421 |
trxb; Thioredoxin reductase |
| 1.1.1.8 |
1 |
1 |
1 |
8 |
mwgspr#1299 |
spr1299 |
is1381-truncation; Degenerate transposase (orf1) |
| 1.1.1.9 |
1 |
1 |
1 |
9 |
mwgspr#0699 |
spr0699 |
Conserved hypothetical protein |
| 1.1.1.10 |
1 |
1 |
1 |
10 |
mwgspr#0754 |
spr0754 |
is861-truncation; Degenerate transposase (orf2) |
| 1.1.1.11 |
1 |
1 |
1 |
11 |
mwgspr#0533 |
spr0533 |
glnp; ABC transporter membrane-spanning permease - glutamine transport |
| 1.1.1.12 |
1 |
1 |
1 |
12 |
mwgspr#0132 |
spr0132 |
is1167-truncation; Degenerate transposase (orf2) |
| 1.1.2.1 |
1 |
1 |
2 |
1 |
mwgspr#0331 |
spr0331 |
Conserved hypothetical protein |
| 1.1.2.2 |
1 |
1 |
2 |
2 |
mwgspr#1583 |
spr1583 |
gmk; Guanylate kinase |
| 1.1.2.3 |
1 |
1 |
2 |
3 |
mwgspr#1065 |
spr1065 |
nrde; Ribonucleoside-diphosphate reductase (major subunit) |
| 1.1.2.4 |
1 |
1 |
2 |
4 |
mwgspr#0941 |
spr0941 |
Hypothetical protein |
| 1.1.2.5 |
1 |
1 |
2 |
5 |
mwgspr#0976 |
spr0976 |
abc-msp; ABC transporter membrane-spanning permease - unknown substrate |
| 1.1.2.6 |
1 |
1 |
2 |
6 |
mwgspr#1428 |
spr1428 |
Hypothetical protein |
| 1.1.2.7 |
1 |
1 |
2 |
7 |
mwgspr#0042 |
spr0042 |
is1167; Transposase (orf1) |
| 1.1.2.8 |
1 |
1 |
2 |
8 |
mwgspr#1291 |
spr1291 |
Hypothetical protein |
Total number of rows: 2112
Table truncated, full table size 155 Kbytes.
| Supplementary data files not provided |
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