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Status
Public on Aug 14, 2009
Title
chromosome 9 INK locus tiling array
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens Manufacturer
Agilent Technology
Manufacture protocol
The oligonucleotide microarray were 4x44k or 8x15k custom designs using probes from the Agilent HD ChIP library and user defined probes.Probes are on average 60 nt in length
Submission date
Jun 19, 2009
Last update date
Aug 14, 2009
Contact name
Thomas A Paul
E-mail(s)
[email protected] Phone
301-435-5571
Fax
301-594-3996
Organization name
NCI-CCR
Department
Laboratory of Cellular Oncology
Street address
37 Convent Dr.
City
Bethesda
State/province
MD
ZIP/Postal code
20892
Country
USA
Samples (40)
GSM419183 , GSM419184 , GSM419185 , GSM419186 , GSM419187 , GSM419188
GSM419189 ,
GSM419190 ,
GSM419191 ,
GSM419192 ,
GSM419193 ,
GSM419194 ,
GSM419195 ,
GSM419196 ,
GSM419197 ,
GSM419198 ,
GSM419199 ,
GSM419200 ,
GSM419201 ,
GSM419202 ,
GSM419203 ,
GSM419204 ,
GSM419205 ,
GSM419206 ,
GSM419207 ,
GSM419208 ,
GSM419209 ,
GSM419210 ,
GSM419211 ,
GSM419212 ,
GSM419213 ,
GSM419214 ,
GSM419215 ,
GSM419216 ,
GSM419217 ,
GSM419218 ,
GSM419219 ,
GSM419220 ,
GSM419221 ,
GSM419222 Series (1)
GSE16730 ChIP-on-chip from acute myeloid leukemia cell lines and clinical samples for H3K4me3, H3K27me3, and EZH2
Data table header descriptions ID CHROMOSOME RANGE_GB based on NCBI hg18
RANGE_START RANGE_END SEQUENCE
Data table ID CHROMOSOME RANGE_GB RANGE_START RANGE_END SEQUENCE A_17_P21343181
chr2
NC_000002.10
69979895
69979954
TGGCTTCATGGCTATCAGTTATAACGTCAGCTCATTTGTGTTTTTAAGTAATGTGTGTCT
A_17_P01262213
chr2
NC_000002.10
69979910
69979969
CAGTTATAACGTCAGCTCATTTGTGTTTTTAAGTAATGTGTGTCTTGTGATGTTTCATCA
A_17_P21343182
chr2
NC_000002.10
69979982
69980041
GGGACCTCTTCATATGCCAGTATAGTCACCCATTTTCCTTTCTATTTGATTGTATTTTCA
A_17_P01262214
chr2
NC_000002.10
69979995
69980054
ATGCCAGTATAGTCACCCATTTTCCTTTCTATTTGATTGTATTTTCATTTTTTTATTTGT
A_17_P21343183
chr2
NC_000002.10
69980853
69980912
TCTAGATGGTTTCAAAGTTTGGTTTTGTTTATTAATGGATAATTTTCTATGCCAGCATGT
A_17_P01262215
chr2
NC_000002.10
69980878
69980937
TGTTTATTAATGGATAATTTTCTATGCCAGCATGTAAATAAATGAGGATAGGGCTAATAA
A_17_P21343184
chr2
NC_000002.10
69980928
69980987
GGGCTAATAATATGCAATTCTGCAAATAGTTTCCAGAAATCAGTAAACCTTTAGGAATCG
A_17_P01262216
chr2
NC_000002.10
69980955
69981014
AGTTTCCAGAAATCAGTAAACCTTTAGGAATCGAACTTTGTAAAAAGGTTATCATCATTT
A_17_P01262217
chr2
NC_000002.10
69981041
69981100
TCTAAGTCATGCTTACTTCCTATTATAGGGAGTTCAAAATCATATACCTCACAAGTAATT
A_17_P21343185
chr2
NC_000002.10
69981064
69981123
TATAGGGAGTTCAAAATCATATACCTCACAAGTAATTTGTTCAGGACTTACCTTCCACCT
A_17_P15253477
chr2
NC_000002.10
69981125
69981184
CAAAAAAATACATGAAAATAGGAATAGAAAAGTAAGACCAAATACATTTATTTTAGCCCC
A_17_P21343186
chr2
NC_000002.10
69981151
69981210
GAAAAGTAAGACCAAATACATTTATTTTAGCCCCACTTCAAATATACTGTTCGTCTGTGT
A_17_P01262218
chr2
NC_000002.10
69981185
69981236
ACTTCAAATATACTGTTCGTCTGTGTATGCCTTTTGGCCAGTGGGTCAGAAT
A_17_P01262219
chr2
NC_000002.10
69981252
69981311
CACCAATATCTAATTAAGTACACTACACAGATAGGCTAATCTTGCATAAGTAGTAATGGG
A_17_P01262220
chr2
NC_000002.10
69982012
69982070
TATGTTGAGTTGACTTGGCTGATCAGAAGACCTGAACAAGAATTTGTGAAAAAGAGGAT
A_17_P21343188
chr2
NC_000002.10
69982072
69982128
GGTGCTACATTCAGAAAGGTCAAGATGGAGTAACACATAACAACCTAGCATTTGTGT
A_17_P01262221
chr2
NC_000002.10
69982104
69982163
ACACATAACAACCTAGCATTTGTGTCTGTTATTCTGTTCTGATTCTTGATTTAAAGATCA
A_17_P01262222
chr2
NC_000002.10
69982464
69982523
TAATTTTTAAAATGAACAAAAAATTGCAAGGGTTGTACAAGAAATGGGATTTAGATGAAT
A_17_P21343189
chr2
NC_000002.10
69982478
69982536
AACAAAAAATTGCAAGGGTTGTACAAGAAATGGGATTTAGATGAATGGCAACCATTCCA
A_17_P01262223
chr2
NC_000002.10
69982541
69982600
TGATATGAGAATATTATTAGCTAAGGTTGTAAGTTAAATTTTGTGTGAATGTGAGTTTTT
43436 4564 Kbytes .Supplementary data files not provided
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