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Series GSE11439 Query DataSets for GSE11439
Status Public on Aug 22, 2008
Title Retinal gene expression in chicks during imposed myopic defocus
Organism Gallus gallus
Experiment type Expression profiling by array
Summary The retina plays an important regulatory role in ocular growth. To screen for new retinal candidate genes that could be involved in the inhibition of ocular growth, we used chick microarrays to analyze the changes in retinal mRNA expression after myopic defocus was imposed by positive lens-wear.
Chicks were raised under a 12h-light/12h-dark cycle (light-onset: 8:00 am and light-offset: 8:00 pm) with unrestricted access to water and food. On the day prior to the experiment, velcro rings were glued to the feathers around the eye under diethylether anaesthesia. Four male white leghorn chicks, aged 9 days, wore +6.9D spectacle lenses over both eyes for 24 hours. Four untreated age-matched male chicks from the same batch served as controls. After decapitation of the chicks, the eyes were enucleated and the retina was prepared. The retinae from both eyes of each chick were pooled for RNA isolation.
Keywords: gene expression comparison
 
Overall design Four samples each: Retina of both eyes of +6.9 diopter lens-treated chicks (plus_lens), Retina of both eyes of untreated control chicks (control)
 
Contributor(s) Schippert R, Feldkaemper MP, Schaeffel F
Citation(s) 18769560
Submission date May 14, 2008
Last update date Mar 19, 2012
Contact name Marita Pauline Feldkaemper
E-mail(s) [email protected]
Phone +49-7071-2987424
Organization name University Eye Hospital Tuebingen, Institute for Ophthalmic Research
Department Section of Neurobiology of the Eye
Lab Prof. Dr. Frank Schaeffel
Street address Calwerstrasse 7/1
City Tuebingen
ZIP/Postal code 72074
Country Germany
 
Platforms (1)
GPL3213 [Chicken] Affymetrix Chicken Genome Array
Samples (8)
GSM288503 retina-plus_lens-rep1
GSM288504 retina-plus_lens-rep2
GSM288505 retina-plus_lens-rep3
Relations
BioProject PRJNA106469

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Supplementary file Size Download File type/resource
GSE11439_RAW.tar 26.5 Mb (http)(custom) TAR (of CEL, EXP)
Processed data included within Sample table

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