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Series GSE116086 Query DataSets for GSE116086
Status Public on May 29, 2019
Title RNAseq in Idiopathic Pulmonary Fibrosis
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Idiopathic pulmonary fibrosis (IPF) is a chronic, progressive and highly lethal lung disease with unknown etiology and poor prognosis.
 
Overall design RNA_Seq Data from nuclear extracts from healthy Ctrl and IPF patient-derived primary fibroblasts
 
Contributor(s) Barreto G, Rubio K, Dobersch S, Cordero J, Günther S
Citation(s) 31110176, 33594057
Submission date Jun 20, 2018
Last update date Mar 10, 2021
Contact name Karla Rubio
E-mail(s) [email protected]
Organization name Max Planck Institute for Heart and Lung Research
Department Lung Cancer Epigenetics
Street address Parkstrasse 1
City Bad Nauheim
ZIP/Postal code 61231
Country Germany
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (4)
GSM3208722 Donor 1
GSM3208723 Donor 2
GSM3208724 IPF 1
Relations
BioProject PRJNA476994
SRA SRP151008

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE116086_FPKM_mRNA.txt.gz 2.0 Mb (ftp)(http) TXT
GSE116086_FPKM_noncoding.txt.gz 1.2 Mb (ftp)(http) TXT
GSE116086_RAW.tar 229.8 Mb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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