GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Series GSE151717
Query DataSets for GSE151717
Status
Public on Apr 15, 2021
Title
Protease-mediated processing of Argonaute proteins controls small RNA association
Organism
Caenorhabditis elegans
Experiment type
Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
33852894
Submission date
Jun 03, 2020
Last update date
Jul 15, 2021
Contact name
Foivos Gypas
E-mail(s)
[email protected]
Organization name
FMI
Lab
Grosshans
Street address
Maulbeerstrasse 66
City
Basel
ZIP/Postal code
4058
Country
Switzerland
Platforms (2)
GPL18245
Illumina HiSeq 2500 (Caenorhabditis elegans)
GPL19757
Illumina NextSeq 500 (Caenorhabditis elegans)
Samples (69)
Less...
More...
GSM4588995
wild_type_A
GSM4588996
wild_type_B
GSM4588997
wild_type_C
GSM4588998
wild_type_D
GSM4588999
wild_type_E
GSM4589000
wild_type_F
GSM4589001
Dpf_3_null_A
GSM4589002
Dpf_3_null_B
GSM4589003
Dpf_3_null_C
GSM4589004
wild_type_G
GSM4589005
wild_type_H
GSM4589006
wild_type_I
GSM4589007
mut_2_A
GSM4589008
mut_2_B
GSM4589009
mut_2_C
GSM4589010
mut_7_A
GSM4589011
mut_7_B
GSM4589012
mut_7_C
GSM4589013
wild_type_A
GSM4589014
wild_type_B
GSM4589015
wild_type_C
GSM4589016
wild_type_D
GSM4589017
wild_type_E
GSM4589018
wild_type_F
GSM4589019
Dpf_3_null_A
GSM4589020
Dpf_3_null_B
GSM4589021
Dpf_3_null_C
GSM4589022
Dpf_3_S784A_A
GSM4589023
Dpf_3_S784A_B
GSM4589024
Dpf_3_S784A_C
GSM4589025
wild_type_G
GSM4589026
wild_type_H
GSM4589027
wild_type_I
GSM4589028
mut_2_A
GSM4589029
mut_2_B
GSM4589030
mut_2_C
GSM4589031
mut_7_A
GSM4589032
mut_7_B
GSM4589033
mut_7_C
GSM4589034
1xFLAG::WAGO-1 A IP
GSM4589035
1xFLAG::WAGO-1 B IP
GSM4589036
1xFLAG::WAGO-1 C IP
GSM4589037
1xFLAG::WAGO-1 dpf-3{delta} A IP
GSM4589038
1xFLAG::WAGO-1 dpf-3{delta} B IP
GSM4589039
1xFLAG::WAGO-1 dpf-3{delta} C IP
GSM4589040
1xFLAG::WAGO-3 A IP
GSM4589041
1xFLAG::WAGO-3 B IP
GSM4589042
1xFLAG::WAGO-3 C IP
GSM4589043
1xFLAG::WAGO-1 A Input
GSM4589044
1xFLAG::WAGO-1 B Input
GSM4589045
1xFLAG::WAGO-1 C Input
GSM4589046
1xFLAG::WAGO-1 dpf-3{delta} A Input
GSM4589047
1xFLAG::WAGO-1 dpf-3{delta} B Input
GSM4589048
1xFLAG::WAGO-1 dpf-3{delta} C Input
GSM4589049
1xFLAG::WAGO-3 A Input
GSM4589050
1xFLAG::WAGO-3 B Input
GSM4589051
1xFLAG::WAGO-3 C Input
GSM4733239
1xFLAG::CSR-1. Replicate A. Input
GSM4733240
1xFLAG::CSR-1. Replicate B. Input
GSM4733241
1xFLAG::CSR-1. Replicate C. Input
GSM4733242
WAGO-1::FLAG P3G, WAGO-3 P2G A3E. Replicate A. Input
GSM4733243
WAGO-1::FLAG P3G, WAGO-3 P2G A3E. Replicate B. Input
GSM4733244
WAGO-1::FLAG P3G, WAGO-3 P2G A3E. Replicate C. Input
GSM4733245
1xFLAG::CSR-1. Replicate A. IP
GSM4733246
1xFLAG::CSR-1. Replicate B. IP
GSM4733247
1xFLAG::CSR-1. Replicate C. IP
GSM4733248
WAGO-1::FLAG P3G, WAGO-3 P2G A3E. Replicate A. IP
GSM4733249
WAGO-1::FLAG P3G, WAGO-3 P2G A3E. Replicate B. IP
GSM4733250
WAGO-1::FLAG P3G, WAGO-3 P2G A3E. Replicate C. IP
This SuperSeries is composed of the following SubSeries:
Less...
More...
GSE151714
Protease-mediated processing of Argonaute proteins controls small RNA association [RNA-Seq]
GSE151715
Protease-mediated processing of Argonaute proteins controls small RNA association [smallRNA-Seq]
GSE151716
Protease-mediated processing of Argonaute proteins controls small RNA association [RIP-Seq]
GSE156540
Protease-mediated processing of Argonaute proteins controls small RNA association [small RNA RIP-seq]
Relations
BioProject
PRJNA637039
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary data files not provided
SRA Run Selector
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
Less...
More...