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| Status |
Public on Aug 18, 2020 |
| Title |
Comparative Transcriptomics of heads and tails between Steinernema carpocapsae and Caenorhabditis elegans |
| Organisms |
Caenorhabditis elegans; Steinernema carpocapsae |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
we used short-reads to perform a comparative analysis S. carpocapsae ALL strain IJs and young adults and C.elegans dauer strain N2 and young adult strain him-8.
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| Overall design |
we used short-reads from the illumina sequencing of cDNA of males and females/hermaphrodites and IJ/dauers to perform a comparative transcriptomic analysis between S. carpocapsae and C. elegans.
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| Contributor(s) |
Rodriguez IM, Clague LS, McGill CJ, Rodriguez B, Mortazavi A |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Aug 17, 2020 |
| Last update date |
Aug 18, 2020 |
| Contact name |
Ali Mortazavi |
| E-mail(s) |
[email protected]
|
| Organization name |
University of California, Irvine
|
| Department |
Developmental and cell biology
|
| Lab |
Mortazavi
|
| Street address |
2300 Biological Sciences 3
|
| City |
Irvine |
| State/province |
CA |
| ZIP/Postal code |
92697 |
| Country |
USA |
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| Platforms (2) |
| GPL19757 |
Illumina NextSeq 500 (Caenorhabditis elegans) |
| GPL20152 |
Illumina NextSeq 500 (Steinernema carpocapsae) |
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| Samples (54)
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| Relations |
| BioProject |
PRJNA657600 |
| SRA |
SRP277817 |
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