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| Status |
Public on Sep 14, 2021 |
| Title |
Transcriptome sequencing of genes related to glucose availability in Schizosaccharomyces pombe by RNA-seq analysis |
| Organism |
Schizosaccharomyces pombe |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Gene expression profiles in Schizosaccharomyces pombe mid-log-phase cells grown in three different Synthetic Dextrose medium with different glucose content were compared using the RNA sequencing method. Expression patterns of genes that function in carbohydrate metabolism were downregulated as expected, and these genes were downregulated in line with the increase in glucose content. Significant and consistent changes in the expression were observed such as genes that encoding retrotransposable elements, heat shock proteins, glutathione S-transferase, cell agglutination protein, and conserved fungal proteins.
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| Overall design |
Examination and comparement of transcriptom data from S.pombe wild type cells grown in different Synhetic Medium with different glucose content.
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| Contributor(s) |
TARHAN C, ÇAKIR Ö |
| Citation(s) |
34460892 |
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| Submission date |
Oct 21, 2020 |
| Last update date |
Sep 14, 2021 |
| Contact name |
Ozgur Cakir |
| E-mail(s) |
[email protected]
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| Phone |
+905555648435
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| Organization name |
Istanbul University
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| Street address |
Vezneciler
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| City |
Istanbul |
| ZIP/Postal code |
34118 |
| Country |
Turkey |
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| Platforms (1) |
| GPL13988 |
Illumina HiSeq 2000 (Schizosaccharomyces pombe) |
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| Samples (3) |
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| Relations |
| BioProject |
PRJNA670335 |
| SRA |
SRP287941 |
