|
| Status |
Public on Jan 10, 2022 |
| Title |
miR-150 Pulldown-sequencing data |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Human CD4+ Total memory cells (CD4+CD25-CD45RA-CCR7+/-) were activated for 5d with anti-CD3/anti-CD28 antibodies and transfected with biotinylated miR-150 mimic or biotinylated mimic negative control by Exiqon. After 24h cells were lysed and miRNA:mRNA complexes pulled-down with streptavidin agarose O/N at 4°C. RNA was then purified using TRI-reagent and RNA zymospin columns. Three independent donors were used for this experiment. Inputs were also sequenced. Total RNA was sequenced in single end mode. This experiment is assessing direct targets bound by miR-150-5p in human T cells.
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| |
|
| Overall design |
RNA from biotinylated miR-150 pulldown sequencing. Total memory cells, human, CD4+.
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| |
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| Contributor(s) |
Bianchi N, Chirichella M |
| Citation(s) |
35143476 |
| |
| Submission date |
Nov 09, 2020 |
| Last update date |
Mar 31, 2022 |
| Contact name |
Francesco Gualdrini |
| E-mail(s) |
[email protected]
|
| Organization name |
European Institute of Oncology
|
| Department |
Department of Experimental Oncology
|
| Lab |
Transcriptional Control in Inflammation and Cancer
|
| Street address |
Via Adamello, 16
|
| City |
Milan |
| ZIP/Postal code |
20139 |
| Country |
Italy |
| |
|
| Platforms (1) |
| GPL21290 |
Illumina HiSeq 3000 (Homo sapiens) |
|
| Samples (12)
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| This SubSeries is part of SuperSeries: |
| GSE161100 |
An RFX/miR-150 axis restrains proliferation of primary human T lymphocytes |
|
| Relations |
| BioProject |
PRJNA675569 |
| SRA |
SRP291717 |
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