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Series GSE17488 Query DataSets for GSE17488
Status Public on Sep 01, 2009
Title Expression data in WT and ES cells overexpressing Satb1
Organism Mus musculus
Experiment type Expression profiling by array
Summary Satb1 and Satb2 are regulators of higher order chromatin in T cells and osteoblasts repectively. We were interested if Satb1 and Satb2 play a role in the regulation of gene expression in ES cells.
ES cells which can inducibly express Satb1 or Satb2 were generated using the tet-ON system. In this experiment, we compared gene expression in uninduced cells to that in cells which had been induced for 24h to express Satb1 ectopcially at very high levels.
 
Overall design Cells were cultured, passaged every 3 days. After trypsinisation cells were grown for 1 day in the presence of LIF only, after 1 day a set of cultures was induced by the addition of DOX to the culture medium. Induction took place for 24h, RNA was generated 48h after passaging.
 
Contributor(s) Savarese F, Engelke R, Nechanitzky R, Grosschedl R
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Submission date Aug 03, 2009
Last update date Mar 04, 2019
Contact name Rudolf Engelke
E-mail(s) [email protected]
Phone +49 761 5108 751
Organization name Max Planck Institute of Immunobiology
Street address Stuebeweg 51
City Freiburg
ZIP/Postal code 79108
Country Germany
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (5)
GSM436112 tetO-Satb1 #1
GSM436113 tetO-Satb1 #2
GSM436114 tetO-Satb1 #1 +DOX
This SubSeries is part of SuperSeries:
GSE17490 Role of Satb1 and Satb2 in embryonic stem cells
Relations
BioProject PRJNA123629

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE17488_RAW.tar 18.1 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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