|
| Status |
Public on Oct 02, 2009 |
| Title |
Gene expression in csr-1 mutants and sequencing of sRNAs from CSR-1 IP complexes and csr-1 and ego-1 mutants |
| Organism |
Caenorhabditis elegans |
| Experiment type |
Expression profiling by genome tiling array
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
19804758 |
| |
| Submission date |
Sep 18, 2009 |
| Last update date |
May 15, 2019 |
| Contact name |
Julie M. Claycomb |
| Organization name |
University of Massachusetts Medical School
|
| Department |
Program in Molecular Medicine
|
| Lab |
Craig Mello
|
| Street address |
373 Plantation Street Biotech2 Suite 219
|
| City |
Worcester |
| State/province |
MA |
| ZIP/Postal code |
01605 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL5634 |
[Ce25b_MR] Affymetrix C. elegans Tiling 1.0R Array |
| GPL9269 |
Illumina Genome Analyzer II (Caenorhabditis elegans) |
|
| Samples (7)
|
| GSM454001 |
small RNAs from wild type worms input control for the IP experiment |
| GSM454002 |
small RNAs from csr-1 mutant animals |
| GSM454003 |
small RNAs from ego-1 mutant animals |
| GSM454004 |
small RNAs from wild type control for csr-1(tm892) and ego-1(om97) |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE18141 |
Gene expression profile of csr-1(tm892) animals compared to wild type |
| GSE18165 |
High-throughput pyrosequencing of endogenous small RNAs from CSR-1 IP complexes and csr-1(tm892) and ego-1(om97) mutants |
|
| Relations |
| BioProject |
PRJNA119517 |
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