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Series GSE190272 Query DataSets for GSE190272
Status Public on Oct 27, 2022
Title An organoids-on-a-chip model of human ARPKD
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Microarray of kidney organoids derived from PKHD1 mutant human pluripotent stem cells.
 
Overall design Total RNA samples were prepared from PKHD1-/- and PKHD1+/- organoids in three different culture conditions: 1. flow, 2. static, or 3. forskolin (FK) on day 35. Gene expression was analyzed using 3D-GeneĀ® Human 25k oligonucleotide microarrays. Sample preparation for array hybridization was carried out as described in the manufacturer's instructions.
 
Contributor(s) Miyoshi T, Hiratsuka K, Morizane R
Citation(s) 36129975
Submission date Dec 06, 2021
Last update date Oct 28, 2022
Contact name Ryuji Morizane
E-mail(s) [email protected]
Organization name Massachusetts General Hospital
Department Nephrology Division
Street address 149 13th Street
City Boston
State/province Massachusetts
ZIP/Postal code 02129
Country USA
 
Platforms (1)
GPL13915 3D-Gene Human Oligo chip 25k V2.1
Samples (6)
GSM5718984 C51_Flow
GSM5718985 C9_Flow
GSM5718986 C51_ECM
Relations
BioProject PRJNA786570

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE190272_RAW.tar 3.1 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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