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Series GSE196504 Query DataSets for GSE196504
Status Public on May 15, 2024
Title Quantitative analysis of wild type and set2 mutant transcriptomes
Organism Schizosaccharomyces pombe
Experiment type Expression profiling by high throughput sequencing
Summary RNA-seq on total RNA of wild type (WT) and set2 mutant (set2d). To determine the changes in transcriptome profile when set2 gene is delete in comparision to WT cells.
 
Overall design The transcriptome profile of log phase asynchronous WT and set2d cells were generated by RNA-seq, in duplicate, using Illumina HiSeq 2000
 
Contributor(s) Lim KK, Chen ES, Li Y, Yang H
Citation(s) 38442274
Submission date Feb 10, 2022
Last update date May 15, 2024
Contact name Ying Li
E-mail(s) [email protected]
Organization name Cancer Science Institute of Singapore
Street address 14 Medical Dr, Singapore
City Singapore
State/province --- Select a state ---
ZIP/Postal code 117599
Country Singapore
 
Platforms (1)
GPL13988 Illumina HiSeq 2000 (Schizosaccharomyces pombe)
Samples (4)
GSM5885580 FourWT0m [WT - 1]
GSM5885581 RWT0m [WT - 2]
GSM5885582 FourS20m [Set2d - 1]
Relations
BioProject PRJNA805230

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE196504_normalized.txt.gz 163.7 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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