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Series GSE261005 Query DataSets for GSE261005
Status Public on Apr 22, 2024
Title Liver cancer development driven by the AP-1/c-Jun~Fra2 dimer through c-Myc
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Hepatocellular carcinoma (HCC) is a leading cause of cancer-related death. HCC incidence is on the rise, while treatment options remain limited. Thus, a better understanding of the molecular pathways involved in HCC development has become a priority to guide future therapies. While previous studies implicated the AP-1 (Fos/Jun) transcription factor family members c-Fos and c-Jun in HCC formation, the contribution of Fos-related antigens 1 and 2 (Fra-1/2) is unknown. Here we show that hepatocyte-restricted expression of a single chain c-Jun~Fra-2 protein, which functionally mimics the c-Jun/Fra-2 AP-1 dimer, results in spontaneous HCC formation in c-Jun~Fra-2hep mice. Several hallmarks of human HCC, such as cell cycle dysregulation and the expression of HCC markers are observed in liver tumors arising in c-Jun~Fra-2hep mice. Tumorigenesis occurs in the context of mild inflammation, low-grade fibrosis and Pparg-driven dyslipidemia. Subsequent analyses revealed increased expression of c-Myc, evidently directly regulated by AP-1 through a conserved distal 3’ enhancer. Importantly, c-Jun~Fra-2-induced tumors revert upon switching off transgene expression, suggesting oncogene addiction to the c-Jun~Fra-2 transgene. Tumors escaping reversion maintained c-Myc and c-Myc target gene expression, likely due to increased c-Fos. Interfering with c-Myc in established tumors using the BET bromodomain inhibitor JQ-1 diminished liver tumor growth in c-Jun~Fra-2 mutant mice. Thus, our data establish c-Jun~Fra-2hep mice as a novel model to study liver tumorigenesis and identify the c-Jun/Fra-2-Myc interaction as a potential target to improve HCC patient stratification and/or therapy.
 
Overall design RNA from murine (adult males, C57BL/6) liver samples was sequenced. Two sets were included in the experiment in twosequencing runs: the first set included 9 samples from mice sacrificed 2 months after transgene induction in 6 controls and 3 mutants. The second set included 10 samples from mice sacrificed 9 months after transgene induction in 3 controls and 3 mutants. in the 3 mutants, 3 samples corresponded to areas that were macroscopically tumor free (periT) and 4 samples corresponded to macroscopically visible tumors: two tumors from mutant -1 and one tumor from each of mutant -2 and mutant-3. Comparative expression profiling was conducted across genotype (mutants compared to controls) and time. Transgene expression in the mutants was always started at weaning (3 weeks of age) by doxycycline removal. Controls were littermates that received the same treatment.

Grant ID: 741888 (ERC AdG 2016)
Grant title: CSI-Fun
Funding source: European Research Council
Grantee name: Erwin F.Wagner

Grant ID: 859860 (ITN 2019)
Grant title: CANCERPREV
Funding source: H2020 - MSCA
Grantee name: Erwin F. Wagner
Web link https://doi.org/10.1073/pnas.2404188121
 
Contributor(s) Bakiri L
Citation(s) 38657045
Submission date Mar 06, 2024
Last update date Nov 20, 2024
Contact name Latifa Bakiri
Organization name Medical University of Vienna
Department Laboratory Medicine
Street address Lazarettgasse 14, BT25/2, 6th floor Lab 2
City Vienna
ZIP/Postal code 1090
Country Austria
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (19)
GSM8131980 mutant-1 - 2 months
GSM8131981 mutant-2 - 2 months
GSM8131982 mutant-3 - 2 months
Relations
BioProject PRJNA1084815

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE261005_Bakiri_19samples_raw_gene_counts_GeneSymbols_GeneTypes.tsv.gz 1.2 Mb (ftp)(http) TSV
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Raw data are available in SRA

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