NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE264551 Query DataSets for GSE264551
Status Public on Apr 22, 2024
Title Translatomics reveals the role of dietary calcium addition in regulating muscle fat deposition in pigs
Organism Sus scrofa
Experiment type Other
Expression profiling by high throughput sequencing
Summary Intramuscular fat (IMF) in pork holds significant importance for economic performance within the pig industry and dietary calcium supplementation enhances the accumulation of intramuscular fat. Additionally, calcium ions inhibit translation and reduce protein synthesis. However, the mechanism by which calcium regulates IMF deposition in muscle through translation remains largely unknown. In this study, we compared the ribosome profiles of the longissimus dorsi muscles of trigram pigs from the normal calcium (NC) group or calcium supplement (HC) group by Ribo-seq, and RNA-seq. By integrating multiple-omics analysis, we further discovered 437 genes that were transcriptionally unchanged but translationally altered and these genes
 
Overall design In this study, we compared the ribosome profiles of the longissimus dorsi muscles of trigram pigs from the normal calcium (NC) group or calcium supplement (HC) group by Ribo-seq, and RNA-seq.
 
Contributor(s) Yu J
Citation(s) 38811812
Submission date Apr 22, 2024
Last update date Jun 12, 2024
Contact name Jingsu Yu
Organization name Guangxi University
Department College of Animal Science and Technology
Street address Daxuedong Road, Xixiangtang District
City Nanning
State/province Guangxi
ZIP/Postal code 530004
Country China
 
Platforms (1)
GPL22918 HiSeq X Ten (Sus scrofa)
Samples (12)
GSM8221216 NC1_RNA
GSM8221217 NC2_RNA
GSM8221218 NC3_RNA
Relations
BioProject PRJNA1103142

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE264551_RAW.tar 73.5 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap