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Series GSE26495 Query DataSets for GSE26495
Status Public on Jan 11, 2011
Title Phenotype, Function and Gene Expression Profiles of PD-1 high CD8 T cells in Healthy Human Adults
Organism Homo sapiens
Experiment type Expression profiling by array
Summary T cell dysfunction is an important feature of many chronic viral infections. In particular, it was shown that PD-1 regulates T cell dysfunction during chronic LCMV infection in mice and PD-1 high cells exhibit an intense exhausted gene signature. These findings were extended to human chronic infections such as HIV, HCV and HBV. However, it is not known if PD-1 high cells of healthy humans have the traits of exhausted cells. In this study, we provide a comprehensive description of phenotype, function and gene expression profiles of PD-1 high versus PD-1 low CD8 T cells in the peripheral blood of healthy human adults as following: 1) The percentage of naive and memory CD8 T cells varied widely in the peripheral blood cells of healthy humans and PD-1 was expressed by the memory CD8 T cells. 2) PD-1 high CD8 T cells in healthy humans did not significantly correlated with the PD-1 high exhausted gene signature of HIV specific human CD8 T cells or chronic LCMV specific CD8 T cells from mice. 3) PD-1 expression did not directly affect the ability of CD8 T cells to secrete cytokines in healthy adults. 4) PD-1 was expressed by the effector memory (TEM) compared to ‘terminally differentiated effector’ (TEMRA) CD8 T cells. 5) Finally, an interesting inverse relationship between CD45RA and PD-1 expression was observed.
 
Overall design We used highly purified PD-1 high and PD-1 low from six healthy adult individuals and naive CD8 T cell populations from four of those individuals for gene expression studies
 
Contributor(s) Duraiswamy J, Ahmed R
Citation(s) 21383243
Submission date Jan 07, 2011
Last update date Mar 25, 2019
Contact name Jaikumar Duraiswamy
E-mail(s) [email protected]
Organization name Emory Univesity
Department Emory Vaccine Center and Department of Microbiology & Immunology
Lab Ahmed lab
Street address 1510, Clifton Road, G211, Rollins Research Center
City Atlanta
State/province GA
ZIP/Postal code 30322
Country USA
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (16)
GSM651411 Naive CD8+ CD3+ T cells - rep1
GSM651412 Naive CD8+ CD3+ T cells - rep2
GSM651413 Naive CD8+ CD3+ T cells - rep3
Relations
BioProject PRJNA136499

Download family Format
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE26495_RAW.tar 83.0 Mb (http)(custom) TAR (of CEL, CHP)
Processed data provided as supplementary file
Processed data included within Sample table

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