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Series GSE271568 Query DataSets for GSE271568
Status Public on Jul 17, 2024
Title Sequencing experiments on poly(U) polymerase mutants in C. elegans [srna]
Organism Caenorhabditis elegans
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary To investigate sRNAs and mRNAs that are targeted by poly(U) polymerases in C. elegans.
 
Overall design We performed Illumina-based sRNA-seq and Oxford Nanopore Technologies-based mRNA-seq on various poly(U) polymerase deletion mutants.
 
Contributor(s) Leanne K, Eleanor M
Citation(s) 39067069
BioProject PRJNA1066861
Submission date Jul 05, 2024
Last update date Oct 16, 2024
Contact name Eleanor Maine
E-mail(s) [email protected]
Organization name Syracuse University
Department Biology
Street address 107 College Place
City Syracuse
State/province New York
ZIP/Postal code 13210
Country USA
 
Platforms (1)
GPL15716 Illumina MiSeq (Caenorhabditis elegans)
Samples (27)
GSM8379859 pup-1(tm1021)_sRNA-seq_rep1
GSM8379860 pup-1(tm1021)_sRNA-seq_rep2
GSM8379861 pup-1(tm1021)_sRNA-seq_rep3

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE271568_sRNA_total_counts.txt.gz 548.7 Kb (ftp)(http) TXT
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