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| Status |
Public on Jan 31, 2012 |
| Title |
WT vs KO comX comparison |
| Platform organism |
Streptococcus thermophilus LMD-9 |
| Sample organism |
Streptococcus thermophilus |
| Experiment type |
Expression profiling by array
|
| Summary |
Transcriptional profiling of S. thermophilus LMD-9 wild-type compared to the isogenic mutant strain CB003 (deletion of comX, STER_0189) for the identification of the ComX regulon.
Cells were grown in CDM medium supplemented with lactose 1% (CDML) and sampled at OD600 = 0.4 for mRNA extraction
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| |
|
| Overall design |
wild-type vs knockout, 2 WT biological replicates (one used as technical replicate for a dye swap), 2 KO biological replicates (one used as technical replicate for a dye swap)
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| |
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| Contributor(s) |
Fontaine L, Clippe A, Hols P |
| Citation(s) |
22287513 |
| |
| Submission date |
Apr 04, 2011 |
| Last update date |
May 02, 2012 |
| Contact name |
Pascal Hols |
| E-mail(s) |
[email protected]
|
| Phone |
+32 10 47 88 96
|
| Fax |
+32 10 47 31 09
|
| Organization name |
Université catholique de louvain
|
| Department |
Institut des Sciences de la Vie
|
| Lab |
Biochimie et Génétique Moléculaire Bactérienne
|
| Street address |
Place Croix du Sud 5
|
| City |
Louvain-La-Neuve |
| ZIP/Postal code |
1348 |
| Country |
Belgium |
| |
|
| Platforms (1) |
| GPL13365 |
UCL Streptococcus thermophilus 15K 60-mer array, Version 1, our ID Agilent-023342 LMD-9v2 |
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| Samples (3) |
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| Relations |
| BioProject |
PRJNA139439 |
