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Series GSE30354 Query DataSets for GSE30354
Status Public on Nov 05, 2011
Title Examination of Ollier Disease and Maffucci Syndrome using IDH Tiling Array
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Ollier disease and Maffucci syndrome are non-hereditary skeletal disorders characterized by multiple enchondromas (Ollier) combined with spindle cell hemangiomas (Maffucci). We found somatic heterozygous IDH1 mutations (R132C and R132H) in 83% of enchondromas, benign cartilage tumors, as well as in 40% of spindle cell hemangiomas, benign vascular lesions. In total, 33 of 42 (78%) patients with Ollier disease and 7 of 13 (54%) patients with Maffucci syndrome carried a mutation in at least one of their tumors. Twelve patients with multiple tumors at different locations displayed identical mutations in separate lesions. Immunohistochemical staining for the R132H IDH1 mutant protein suggested intraneoplastic as well as somatic mosaicism. IDH1 mutations were less frequent (63%) in high grade malignant cartilage tumors in Ollier disease, suggesting that IDH1 is less important for malignant transformation. IDH1 and IDH2 mutations were found in 36% of sporadic cartilage tumors and in four cell lines derived from sporadic chondrosarcomas.
 
Overall design 16 samples were analyzed in two color experiment, using normal male or female as a reference sample (gender mismatched)
 
Contributor(s) Pansuriya T
Citation(s) 22057234
Submission date Jul 01, 2011
Last update date Jan 17, 2013
Contact name Twinkal Chandubhai Pansuriya
E-mail(s) [email protected]
Phone 0031715266528
Organization name LUMC
Department Pathology
Street address Albinusdreef 2
City Leiden
State/province Zuid-Holland
ZIP/Postal code 2333ZA
Country Netherlands
 
Platforms (1)
GPL13754 Agilent-032447 Custom Human IDH Array
Samples (16)
GSM752994 L0172
GSM752995 L0898
GSM752996 L1083
This SubSeries is part of SuperSeries:
GSE30844 Somatic mosaic IDH1 and IDH2 mutations are associated with enchondroma and spindle cell haemangioma in Ollier disease and Maffucci syndrome
Relations
BioProject PRJNA154811

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE30354_RAW.tar 24.7 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
Processed data provided as supplementary file

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