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Series GSE39824 Query DataSets for GSE39824
Status Public on Aug 02, 2012
Title Expression data from Chicken duodenum
Organism Gallus gallus
Experiment type Expression profiling by array
Summary The objective of this study was to decipher the molecular basis of feed efficiency in meat-type chicken using duodenum tissues from a chicken population divergently selected for residual feed intake (RFI). Residual feed intake is the deviation of expected feed intake from actual feed intake. Chickens that consume less feed than expected are efficient (LRFI) and chickens that consume more feed than expected are inefficient (HRFI). A divergent selection for RFI was undertaken using an unselected random bred chicken population. RFI at day 35-42 was used as a criterion for selecting low (LRFI) and high (HRFI) RFI. Duodenum tissues were collected from 16 male chickens under sterile conditions experimentation. Tissues were collected from 4 males at days 35 and 42 in each line.
 
Overall design Duodenum at 35 and 42 days from a chicken population divergently selected for residual feed intake were utilized for RNA extraction and hybridization on Affymetrix microarrays.
 
Contributor(s) Aggrey SE
Citation(s) 25782841
Submission date Aug 01, 2012
Last update date Sep 25, 2015
Contact name Samuel E Aggrey
E-mail(s) [email protected]
Phone +1-706-542-1354
Organization name University of Georgia
Department Poultry Science
Lab NutriGenomics
Street address 110 Cedar Street
City Athens
State/province GA
ZIP/Postal code 30602
Country USA
 
Platforms (1)
GPL3213 [Chicken] Affymetrix Chicken Genome Array
Samples (16)
GSM979698 duodenum LRFI day 35 rep1
GSM979699 duodenum LRFI day 35 rep2
GSM979700 duodenum LRFI day 35 rep3
Relations
BioProject PRJNA171775

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE39824_RAW.tar 51.9 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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