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GEO accession:
Series GSE42811
Query DataSets for GSE42811
Status
Public on Feb 14, 2014
Title
Chronic cocaine-regulated epigenome in mouse
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
24758366
Submission date
Dec 08, 2012
Last update date
May 15, 2019
Contact name
Li Shen
E-mail(s)
[email protected]
Organization name
Icahn School of Medicine at Mount Sinai
Department
Neuroscience
Lab
Shen
Street address
1425 Madison Ave
City
New York
State/province
NY
ZIP/Postal code
10029
Country
USA
Platforms (2)
GPL9250
Illumina Genome Analyzer II (Mus musculus)
GPL13112
Illumina HiSeq 2000 (Mus musculus)
Samples (53)
Less...
More...
GSM1050254
mRNA-seq Coc Rep1
GSM1050255
mRNA-seq Coc Rep2
GSM1050256
mRNA-seq Coc Rep3
GSM1050257
mRNA-seq Sal Rep1
GSM1050258
mRNA-seq Sal Rep2
GSM1050259
mRNA-seq Sal Rep3
GSM1050334
H3K27me3 ChIP-seq Coc Rep1
GSM1050335
H3K27me3 ChIP-seq Coc Rep2
GSM1050336
H3K27me3 ChIP-seq Coc Rep3
GSM1050337
H3K27me3 ChIP-seq Sal Rep1
GSM1050338
H3K27me3 ChIP-seq Sal Rep2
GSM1050339
H3K27me3 ChIP-seq Sal Rep3
GSM1050340
H3K36me3 ChIP-seq Coc Rep1
GSM1050341
H3K36me3 ChIP-seq Coc Rep2
GSM1050342
H3K36me3 ChIP-seq Coc Rep3
GSM1050343
H3K36me3 ChIP-seq Sal Rep1
GSM1050344
H3K36me3 ChIP-seq Sal Rep2
GSM1050345
H3K36me3 ChIP-seq Sal Rep3
GSM1050346
H3K4me1 ChIP-seq Coc Rep1
GSM1050347
H3K4me1 ChIP-seq Coc Rep2
GSM1050348
H3K4me1 ChIP-seq Coc Rep3
GSM1050349
H3K4me1 ChIP-seq Sal Rep1
GSM1050350
H3K4me1 ChIP-seq Sal Rep2
GSM1050351
H3K4me1 ChIP-seq Sal Rep3
GSM1050352
H3K4me3 ChIP-seq Coc Rep1
GSM1050353
H3K4me3 ChIP-seq Coc Rep2
GSM1050354
H3K4me3 ChIP-seq Coc Rep3
GSM1050355
H3K4me3 ChIP-seq Sal Rep1
GSM1050356
H3K4me3 ChIP-seq Sal Rep2
GSM1050357
H3K4me3 ChIP-seq Sal Rep3
GSM1050358
H3K9me2 ChIP-seq Coc Rep1
GSM1050359
H3K9me2 ChIP-seq Coc Rep2
GSM1050360
H3K9me2 ChIP-seq Coc Rep3
GSM1050361
H3K9me2 ChIP-seq Sal Rep1
GSM1050362
H3K9me2 ChIP-seq Sal Rep2
GSM1050363
H3K9me2 ChIP-seq Sal Rep3
GSM1050364
H3K9me3 ChIP-seq Coc Rep3
GSM1050365
RNA Pol II ChIP-seq Coc Rep1
GSM1050366
RNA Pol II ChIP-seq Coc Rep2
GSM1050367
RNA Pol II ChIP-seq Coc Rep3
GSM1050368
RNA Pol II ChIP-seq Sal Rep1
GSM1050369
RNA Pol II ChIP-seq Sal Rep2
GSM1050370
RNA Pol II ChIP-seq Sal Rep3
GSM1053091
DNA input1
GSM1053092
DNA input2
GSM1053093
DNA input3
GSM1053094
DNA input4
GSM1277962
Acute Coc Rep1
GSM1277963
Acute Coc Rep2
GSM1277964
Acute Coc Rep3
GSM1277965
Acute Sal Rep1
GSM1277966
Acute Sal Rep2
GSM1277967
Acute Sal Rep3
This SuperSeries is composed of the following SubSeries:
GSE42805
Chronic cocaine-regulated epigenome in mouse [RNA-Seq]
GSE42810
Chronic cocaine-regulated epigenome in mouse [ChIP-Seq]
Relations
BioProject
PRJNA183440
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE42811_RAW.tar
29.9 Gb
(http)
(custom)
TAR (of BED, BW, TXT)
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