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Series GSE46991 Query DataSets for GSE46991
Status Public on Oct 23, 2013
Title Genome-wide map of p53 binding sites by ChIP-seq in human lymphoblastoid cell lines treated with doxorubicin
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We have used chromatin immune-precipitation with parallel sequencing (ChIP-Seq) technology to identify genome-wide p53 binding in human lymphoblastoid cell lines treated with a DNA-damaging chemotherapeutic reagent doxorubicin.
 
Overall design ChIP-Seq analysis of p53 binding sites in human lymphoblastoid cells treated with Doxorubicin or vehicle
 
Contributor(s) Campbell MR, Wang X, Bell DA
Citation(s) 24120139
Submission date May 15, 2013
Last update date May 15, 2019
Contact name Xuting Wang
E-mail(s) [email protected]
Phone 9842873840
Organization name NIEHS/NIH
Street address 111 TW Alexander Dr
City Research Triangle Park
State/province NC
ZIP/Postal code 27709
Country USA
 
Platforms (1)
GPL9115 Illumina Genome Analyzer II (Homo sapiens)
Samples (4)
GSM1142696 p53 ChIP LCL Doxo
GSM1142697 p53 ChIP LCL NT
GSM1142698 input LCL Doxo
Relations
BioProject PRJNA203239
SRA SRP022844

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE46991_hg19.QuEST.p53_ChIP_LCL_Doxo.narrowPeak.txt.gz 311.3 Kb (ftp)(http) TXT
GSE46991_hg19.QuEST.p53_ChIP_LCL_NT.narrowPeak.txt.gz 13.7 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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