|
| Status |
Public on Oct 28, 2014 |
| Title |
Genome-wide nucleosome, histone and Pol II maps for wild type Saccharomyces cerevisiae induced with 3-aminotriazole (3AT) |
| Organism |
Saccharomyces cerevisiae |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Paired-end sequencing study of (1) nucleosome core particles and under-digested chromatin from MNase-treated nuclei; (2) ChIP samples for HA-tagged histone H4 and H2B; (3) ChIP for the Rpb3 subunit of Pol II.
|
| |
|
| Overall design |
Nucleosomal DNA and immunopurified sonicated DNA fragments were subjected to paired-end sequencing.
|
| |
|
| Contributor(s) |
Cole HA, Ocampo J, Clark DJ |
| Citation(s) |
25348398 |
| |
| Submission date |
Jan 29, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
David Johannes Clark |
| E-mail(s) |
[email protected]
|
| Phone |
3014966966
|
| Organization name |
NICHD, NIH
|
| Department |
DDB
|
| Lab |
SCGE
|
| Street address |
6 Center Drive Bldg 6A Rm 2A02
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20892 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL13821 |
Illumina HiSeq 2000 (Saccharomyces cerevisiae) |
|
| Samples (30)
|
|
| Relations |
| BioProject |
PRJNA236770 |
| SRA |
SRP036052 |
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