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Series GSE63197 Query DataSets for GSE63197
Status Public on Nov 25, 2014
Title Human RORγt+ CD34+ cells are lineage-specified progenitors of group 3 RORγt+ innate lymphoid cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Group 3 innate lymphoid cells (ILC3) are defined by the expression of RORγt, which is selectively required for their development. The lineage-specified progenitor cells of human ILC3 and their developmental site after birth remain undefined. Here we identified a novel population of human CD34+ hematopoietic progenitor cells (HPC) expressing RORγt and sharing with ILC3 a distinct transcriptional signature. RORγt+ CD34+ HPC were located in tonsils and intestinal lamina propria (LP) and selectively differentiated towards ILC3. Conversely, RORγt- CD34+ HPC displayed commitment potential for both ILC3 and NK cells and the differentiation fate towards these two cell lineages was determined by cytokine and aryl hydrocarbon receptor (AhR) signaling. Thus, we propose that RORγt+ CD34+ cells represent human lineage-specified progenitors of IL-22+ ILC3 and that tonsils as well as intestinal LP might be preferential sites of their differentiation.
 
Overall design ILC3, NK cells and the CD34+ HPC subsets were sorted from tonsils of 6 distinct donors to purity above 95%. cRNA of the sorted cell populations was hybridized to an Agilent Whole Human Genome Oligo Microarrays (8x60K v2, Design ID 039494)
 
Contributor(s) Montaldo E, Teixeira-Alves LG, Glatzer T, Durek P, Stervbo U, Hamann W, Babic M, Paclik D, Stölzel K, Gröne J, Lozza L, Juelke K, Matzmohr N, Loiacono F, Petronelli F, Huntington ND, Moretta L, Mingari MC, Romagnani C
Citation(s) 25500367, 33741932
Submission date Nov 12, 2014
Last update date Apr 20, 2021
Contact name Chiara Romagnani
E-mail(s) [email protected]
Phone +493028460681
Organization name Deutsches Rheuma Forschungszentrum - Leibniz-Gemeinschaft
Lab Innate Immunity
Street address Chariteplatz 1
City Berlin
ZIP/Postal code 10117
Country Germany
 
Platforms (1)
GPL17077 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
Samples (35)
GSM1543715 10 c -
GSM1543716 10 c +
GSM1543717 10 high
Relations
BioProject PRJNA266980

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE63197_RAW.tar 430.6 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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