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Series GSE6662 Query DataSets for GSE6662
Status Public on Feb 08, 2007
Title Cardiac-specific deletion of ménage-à-trois-1 (MAT1)
Organism Mus musculus
Experiment type Expression profiling by array
Summary The Cdk7/cyclin H/ménage-à-trois 1 (MAT1) heterotrimer has proposed functions in transcription as the kinase component of basal transcription factor TFIIH and is activated in adult hearts by hypertrophic pathways. Using cardiac-specific Cre, we ablated MAT1 in myocardium. Despite reduced Cdk7 activity, MAT1-deficient hearts grew normally. However, fatal heart failure ensued at 6-8 weeks. By microarray profiling, quantitative RT-PCR, and Western blotting at 4 weeks, genes for energy metabolism were found to be suppressed selectively, including targets of peroxisome proliferator-activated receptor-gamma coactivator-1 (PGC-1). Cardiac metabolic defects were substantiated in isolated perfused hearts and isolated mitochondria. In culture, deleting MAT1 with Cre disrupted PGC-1 function: PGC-1α failed to activate PGC-1-responsive promoters and nuclear receptors, GAL4-PGC-1α was functionally defective, and PGC-1β likewise was deficient. PGC-1 was shown to interact with MAT1 and Cdk7, in co-precipitation assays. Thus, we demonstrate an unforeseen essential role for MAT1 in operation of the PGC-1 family of co-activators.
Keywords: conditional knockout in mice
 
Overall design MAT1F/F mice (Korsisaari et al., 2002) were bred with mice expressing Cre recombinase under the control of the cardiomyocyte-specific α-myosin heavy chain (αMHC) promoter (Gaussin et al., 2002a) and back-bred to MAT1F/F mice to generate the cardiac-specific knockout (αMHC-Cre+/0; MAT1F/F; CKO; Fig. 1A, B). Control mice were αMHC-Cre+/0; MAT1F/+ littermates, differing by the presence of one wild-type MAT1 allele, and excluding Cre-mediated toxicity as a basis for phenotypic disparity. Cardiac RNA samples were analyze at 2 or 4 weeks of age (N = 3-5 for each condition tested.
 
Contributor(s) Sano M, Schneider MD
Citation(s) 17276355
Submission date Jan 05, 2007
Last update date Feb 18, 2018
Contact name Michael Schneider
E-mail(s) [email protected]
Phone 713-798-6683
Fax 713-798-7437
Organization name Baylor College of Medicine
Department Center for Cardiovascular Development
Street address One Baylor Plaza, Room 506D
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platforms (1)
GPL81 [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array
Samples (15)
GSM154142 Heart, MAT1 control, 4 wk, sample 1
GSM154143 Heart, MAT1 control, 4 wk, sample 2
GSM154144 Heart, MAT1 control, 4 wk, sample 3
Relations
BioProject PRJNA98623

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE6662_RAW.tar 33.1 Mb (http)(custom) TAR (of CEL)

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