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Series GSE69862 Query DataSets for GSE69862
Status Public on Oct 10, 2016
Title Gene profiling of v-Src transformed primary chicken embryo fibroblasts (CEFs) under the condition of AP-1 repression
Organism Gallus gallus
Experiment type Expression profiling by array
Summary To investigate the role of AP-1 in Src-mediated transformation, we undertook a gene profiling study to characterize the transcriptomes of v-Src-transformed CEF expressing either the c-Jun dominant-negative mutant TAM67 or JunD shRNA.
 
Overall design CEFs were transfected with B-type RSV viral vectors expressing JunD shRNA, GFP control, or the c-Jun TAM67 dominant negative mutant. Transfected CEFs were superinfected with the temperature sensitive A-type NY72-4 RSV. Infected CEFs were cultured at the non-permissive temperature until such time when temperature shift was performed to induce v-Src activation. All experimental groups consisted of three biological replicates except for NY72-4/RCAS(B)-JunD shRNA permissive which was conducted in sextuplicate.
[Type] viral transformation of primary cells, transformation, AP-1 inhibition, temperature sensitive mutant, v-Src, apoptosis
 
Contributor(s) Maślikowski BM, Wang L, Wu Y, Fielding B, Bédard P
Citation(s) 27795443
Submission date Jun 15, 2015
Last update date Nov 01, 2016
Contact name Bart Michal Maslikowski
E-mail(s) [email protected]
Organization name McMaster University
Department Biology
Lab LS-422
Street address 1280 Main St. West
City Hamilton
State/province Ontario
ZIP/Postal code L8S 4K1
Country Canada
 
Platforms (1)
GPL3213 [Chicken] Affymetrix Chicken Genome Array
Samples (21)
GSM1711457 CEF_JunD-shRNA_NY72-4_41.5˚C_rep1
GSM1711458 CEF_JunD-shRNA_NY72-4_41.5˚C_rep2
GSM1711459 CEF_JunD-shRNA_NY72-4_41.5˚C_rep3
Relations
BioProject PRJNA286993

Download family Format
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE69862_RAW.tar 74.2 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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