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Series GSE77631 Query DataSets for GSE77631
Status Public on Mar 15, 2016
Title Nucleosome Positioning Dynamics Through the Yeast Metabolic Cycle
Organism Saccharomyces cerevisiae
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary We present Micrococcal Nuclease digestion maps of S. cerevisiae through the progression of the Yeast Metabolic Cycle. We demonstrate that nucleosome positions at many promoters are dynamic, and remodeling events at promoters have significant consequences with respect to gene expression.
 
Overall design Examination of nucleosome positions and transcriptional output through metabolic oscillations in budding yeast.
 
Contributor(s) Nocetti N, Whitehouse I
Citation(s) 26966245
Submission date Feb 05, 2016
Last update date May 15, 2019
Contact name Iestyn Whitehouse
E-mail(s) [email protected]
Organization name Sloan-Kettering Institute
Department Molecular Biology
Street address 1275 York Avenue
City New York
State/province New York
ZIP/Postal code 10065
Country USA
 
Platforms (1)
GPL13821 Illumina HiSeq 2000 (Saccharomyces cerevisiae)
Samples (24)
GSM2055464 Time Point 1 - MNaseSeq
GSM2055465 Time Point 2 - MNaseSeq
GSM2055466 Time Point 3 - MNaseSeq
Relations
BioProject PRJNA311054
SRA SRP069352

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE77631_RAW.tar 74.0 Mb (http)(custom) TAR (of WIG)
GSE77631_RPKM_Raw_andNormalized.xlsx.gz 2.4 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Processed data provided as supplementary file
Processed data are available on Series record
Raw data are available in SRA

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