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Series GSE9650 Query DataSets for GSE9650
Status Public on Nov 27, 2007
Title Chronic viral infection of naive, effector, memory and exhausted virus-specific CD8 T cells
Organism Mus musculus
Experiment type Expression profiling by array
Summary CD8 T cells normally differentiate from resting naïve T cells into function effector and then memory CD8 T cells following acute infections. During chronic viral infections, however, virus-specific CD8 T cells often become exhausted. We used microarrays to examine the gene expression differences between naive, effector, memory and exhausted virus-specific CD8 T cells following lymphocytic choriomeningitis virus infection.
Keywords: infection response
 
Overall design Three or four independent samples were sorted by flow cytometry for each cell type (naive, effector, memory and exhausted) virus-specific CD8 T cells. RNA was extracted and hybridized to Affymetrix microarrays.
 
Citation(s) 17950003
Submission date Nov 20, 2007
Last update date Feb 18, 2018
Contact name Shruti Subramaniam
Organization name Emory University
Street address Clifton Road
City Atlanta
State/province GA
ZIP/Postal code 30322
Country USA
 
Platforms (3)
GPL81 [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array
GPL82 [MG_U74Bv2] Affymetrix Murine Genome U74B Version 2 Array
GPL83 [MG_U74Cv2] Affymetrix Murine Genome U74 Version 2 Array
Samples (25)
GSM235537 Day 0 GP33-specific-1_MG-U74A
GSM235538 Day 0 GP33-specific-2_MG-U74A
GSM235539 Day 0 GP33-specific-3_MG-U74A
Relations
BioProject PRJNA103517

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE9650_RAW.tar 69.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
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