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| Status |
Public on Mar 22, 2017 |
| Title |
Transcriptome analysis of Streptococcus gallolyticus subsp. gallolyticus in interaction with THP-1 macrophages [BAA-2069 5h] |
| Organism |
Streptococcus gallolyticus subsp. gallolyticus |
| Experiment type |
Expression profiling by array
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| Summary |
Background: Streptococcus gallolyticus subsp. gallolyticus (S. gallolyticus) is a pathogen of infective endocarditis. It was observed previously that this bacterium survives longer in macrophages than other species and the phagocytic uptake by and survival in THP-1 macrophages is strain-dependent. Methods: The phagocytosis assay was performed with THP-1 macrophages. S. gallolyticus specific whole genome microarrays were used for transcriptome analysis. Results: Better survival in macrophages was observed for UCN34, BAA-2069 and ATCC43143 than for DSM16831 and LMG17956. S. gallolyticus strains show high resistance to tested bactericidal agents (acid, lysozyme and hydrogen peroxide). S. gallolyticus stimulates significant lower cytokine gene expression and causes less lysis of macrophages compared to the control strain S. aureus. S. gallolyticus reacts to oxidative burst with a higher gene expression of NADH oxidase initially at the early phase. Expression of genes involved in D-alanylation of teichoic acid, carbohydrate metabolism and transport systems were upregulated thereafter. Conclusion: S. gallolyticus is very resistant to bactericidal agents normally causing degradation of bacteria in phagolysosomes. Additionally, the D-alanylation of teichoic acid is an important factor for survival.
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| Overall design |
Analysis of two S. gallolyticus subsp. gallolyticus strains (BAA-2069 and UCN 34) at three different time points (-60min; 0h and 5h) of phagocytosis. For each time point and strain three biological replicates were taken and normalized on the -60min-timepoint.
This series contains 3 re-analyzed samples from GSE96822 (GSM2544657, GSM2544659, and GSM2544661).
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| Contributor(s) |
Grimm I, Vollmer T, Dreier J |
| Citation(s) |
28672015 |
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| Submission date |
Mar 20, 2017 |
| Last update date |
Jul 01, 2019 |
| Contact name |
Imke Grimm |
| E-mail(s) |
[email protected]
|
| Organization name |
Herz- und Diabeteszentrum NRW; Universitätsklinikum der Ruhr-Universität Bochum
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| Department |
Institut für Laboratoriums- und Transfusionsmedizin
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| Street address |
Georgstraße 11
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| City |
Bad Oeynhausen |
| ZIP/Postal code |
32545 |
| Country |
Germany |
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| Platforms (1) |
| GPL23196 |
Agilent-072445 ArrayXS_S.gallolyticus_01-2015 [gene version] |
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| Samples (6)
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| This SubSeries is part of SuperSeries: |
| GSE96865 |
Transcriptome analysis of Streptococcus gallolyticus subsp. gallolyticus in interaction with THP-1 macrophages |
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| Relations |
| BioProject |
PRJNA379952 |
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