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Series GSE96975 Query DataSets for GSE96975
Status Public on Nov 22, 2017
Title Integrated target discovery screens identify IL11 as novel therapeutic target for fibrosis [human]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Cardiac fibrosis is the final common pathology in heart disease. Here we establish an integrated imaging-genomic discovery platform using primary human heart fibroblasts to identify new drug targets for cardiac fibrosis. Genome wide analyses identify IL11, a secreted cytokine amenable to therapeutic inhibition, as the leading pro-fibrotic candidate. We demonstrate an autocrine loop of IL11 activity that is critical for fibrosis and acts as a nexus of signalling convergence for multiple pro-fibrotic stimuli. IL11 signals in cis and trans via the ERK cascade to activate a programme of fibrosis primarily at the level of protein translation. Injection of IL11 to mice causes fibrosis of the heart, kidney, lung, skin and liver whereas genetic ablation of the IL11 receptor prevented fibrosis across tissues. These data define a new non-canonical fibrogenic pathway and prioritise IL11 as a novel therapeutic target for fibrosis of the heart and other organs
 
Overall design 24 human cardiac fibroblasts. 10 basal, 10 IL11 induced, 4 TGFB1 induced. Cardiac fibroblasts were cultured in serum-free media for at least 16 hours prior to treatment with either TGFB1 or IL11.
 
Contributor(s) Cook SA, Schafer S, Chow K, Chothani SP, Moreno-Moral A, Widjaja AA, Pua CJ
Citation(s) 29160304
Submission date Mar 23, 2017
Last update date May 15, 2019
Contact name Sonia Chothani
E-mail(s) [email protected]
Organization name Duke-NUS school of medicine
Lab Prof. Stuart Cook
Street address 8 College Road
City Singapore
ZIP/Postal code 169857
Country Singapore
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (24)
GSM2547128 Pa163_basal
GSM2547129 Pa163_IL11
GSM2547130 Pa166_basal
This SubSeries is part of SuperSeries:
GSE97117 Integrated target discovery screens identify IL11 as novel therapeutic target for fibrosis
Relations
BioProject PRJNA380254
SRA SRP102374

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE96975_Raw_counts_IL11_Basal_4patients.txt.gz 571.3 Kb (ftp)(http) TXT
GSE96975_Raw_counts_IL11_Basal_6patients.txt.gz 775.2 Kb (ftp)(http) TXT
GSE96975_Raw_counts_IL11_Basal_combined.txt.gz 1018.4 Kb (ftp)(http) TXT
GSE96975_Raw_counts_TGFB1_Basal_4patients.txt.gz 563.1 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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