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Series GSE96991 Query DataSets for GSE96991
Status Public on Nov 22, 2017
Title Integrated target discovery screens identify IL11 as novel therapeutic target for fibrosis [mouse]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Cardiac fibrosis is the final common pathology in heart disease. Here we establish an integrated imaging-genomic discovery platform using primary human heart fibroblasts to identify new drug targets for cardiac fibrosis. Genome wide analyses identify IL11, a secreted cytokine amenable to therapeutic inhibition, as the leading pro-fibrotic candidate. We demonstrate an autocrine loop of IL11 activity that is critical for fibrosis and acts as a nexus of signalling convergence for multiple pro-fibrotic stimuli. IL11 signals in cis and trans via the ERK cascade to activate a programme of fibrosis primarily at the level of protein translation. Injection of IL11 to mice causes fibrosis of the heart, kidney, lung, skin and liver whereas genetic ablation of the IL11 receptor prevented fibrosis across tissues. These data define a new non-canonical fibrogenic pathway and prioritise IL11 as a novel therapeutic target for fibrosis of the heart and other organs
 
Overall design 18 mouse cardiac fibroblasts. 3 wildtype, 3 knockout IL11RA-/- , 3 conditions (Basal, TGFB1, IL11). Cardiac fibroblasts were cultured in serum-free media for at least 16 hours prior to treatment with either TGFB1 or IL11.
 
Contributor(s) Cook SA, Schafer S, Chow K, Chothani SP, Moreno-Moral A, Widjaja AA, Pua CJ
Citation(s) 29160304
Submission date Mar 24, 2017
Last update date May 15, 2019
Contact name Sonia Chothani
E-mail(s) [email protected]
Organization name Duke-NUS school of medicine
Lab Prof. Stuart Cook
Street address 8 College Road
City Singapore
ZIP/Postal code 169857
Country Singapore
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (18)
GSM2548641 HOM1_Ms_Fib_BL
GSM2548642 HOM1_Ms_Fib_IL11
GSM2548643 HOM1_Ms_Fib_TGFB
This SubSeries is part of SuperSeries:
GSE97117 Integrated target discovery screens identify IL11 as novel therapeutic target for fibrosis
Relations
BioProject PRJNA380340
SRA SRP102432

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Supplementary file Size Download File type/resource
GSE96991_RNAseq.counts.txt.gz 817.7 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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