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Sample GSM100634 Query DataSets for GSM100634
Status Public on Jun 07, 2006
Title MPI-206
Sample type RNA
 
Source name Frozen tissue
Organism Homo sapiens
Characteristics sample.ID : MPI-206
Relapse: no
Age : 82
Sex : male
Morphologic.diagnosis : DLBCL
CD20.expr. : present
CD10.expr. : absent
bcl2.expr. : present
Ki.67.score : 50
CD5.expr. : absent
bcl6.expr. : present
MYC.Partner : MYC-negative
BCL6.Break : absent
IGH.BCL2.Fusion : absent
Chromosomal.Complexity.Score : 15
Genetic.Group : MYC.neg
AnnArbor.Stage : III
Lesions : nodal + extranodal
B.Symptoms : present
Survival.Status : dead
FollowupTime..months. : 5.3
Radiotherapy : no
RITUXIMAB : no
Response.to.treatment : PR
Chemotherapy : other
Molecular.Diagnosis : non-mBL
GCB.ABC.signature : unclassified
Training.Test : Test
core.BL : no
BL.probability : 0
Extracted molecule total RNA
Label Biotin
 
Description Mature aggressive B-cell lymphoma
Data processing Probe level normalization was done using the calibration and variance stabilization method by Huber et al. (Bioinformatics 2002, PMID: 12169536). Probe-set summarization was performed using the median polish method on the normalized data (Irrizary et al. Nucleic Acids Research 2003, PMID: 12582260).
 
Submission date Mar 15, 2006
Last update date Jun 28, 2010
Contact name Michael Hummel
Organization name Universitätsmedizin Berlin, Campus Benjamin Franklin
Department Institute of Pathology
Street address Hindenburgdamm 30
City Berlin
ZIP/Postal code 12200
Country Germany
 
Platform ID GPL96
Series (1)
GSE4475 A Biologic Definition of Burkitt's Lymphoma from Transcriptional and Genomic Profiling
Relations
Affiliated with GSE22470

Data table header descriptions
ID_REF
VALUE Normalized and summarized probeset expression value on additive arcsin (log-like) scale

Data table
ID_REF VALUE
1007_s_at 8.51113722586683
1053_at 8.11004518763815
117_at 7.81274750186502
121_at 9.76725030357739
1255_g_at 6.89855676828499
1294_at 8.10080540815181
1316_at 7.30651811551438
1320_at 7.06429834582062
1405_i_at 7.96638895096154
1431_at 6.21758085680525
1438_at 8.13203662360213
1487_at 8.58562663781116
1494_f_at 7.83056448696265
1598_g_at 9.24648476740423
160020_at 8.87398691747333
1729_at 8.51813376982727
1773_at 7.46596148938067
177_at 7.35877235126837
179_at 9.78478367189051
1861_at 7.27854259574024

Total number of rows: 22283

Table truncated, full table size 604 Kbytes.




Supplementary file Size Download File type/resource
GSM100634.CEL.gz 3.4 Mb (ftp)(http) CEL

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