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Sample GSM102130 Query DataSets for GSM102130
Status Public on Mar 30, 2006
Title LS-39
Sample type RNA
 
Source name lung
Organism Homo sapiens
Characteristics Cancer
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from lung squamous cell carcinoma samples according to Standard Trizol protocol.
Label biotin
Label protocol Approximately 5 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description lung squamous carcinoma
Data processing Affymetrix Microarray Suite version 5.0
 
Submission date Mar 29, 2006
Last update date Mar 29, 2006
Contact name Jack Yu
E-mail(s) [email protected]
Phone 858-320-3362
Fax 858-784-3182
Organization name Veridex, LLC
Street address 3210 Merryfield Row
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL96
Series (1)
GSE4573 Gene expression signatures for predicting prognosis of squamous cell lung carcinomas

Data table header descriptions
ID_REF
VALUE MAS5-calculated Signal intensity after global scaling the average intensity to 600.

Data table
ID_REF VALUE
AFFX-BioB-5_at 339.6
AFFX-BioB-M_at 492.1
AFFX-BioB-3_at 302.2
AFFX-BioC-5_at 1149.8
AFFX-BioC-3_at 1078.1
AFFX-BioDn-5_at 1652.7
AFFX-BioDn-3_at 6605.4
AFFX-CreX-5_at 10433.7
AFFX-CreX-3_at 15554.4
AFFX-DapX-5_at 23.9
AFFX-DapX-M_at 48.8
AFFX-DapX-3_at 6
AFFX-LysX-5_at 29.4
AFFX-LysX-M_at 11
AFFX-LysX-3_at 15.5
AFFX-PheX-5_at 5.3
AFFX-PheX-M_at 6
AFFX-PheX-3_at 22.9
AFFX-ThrX-5_at 11.4
AFFX-ThrX-M_at 20.1

Total number of rows: 22283

Table truncated, full table size 361 Kbytes.




Supplementary data files not provided
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