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| Status |
Public on Nov 17, 2012 |
| Title |
BD2-Y |
| Sample type |
RNA |
| |
|
| Source name |
monocytes_BD2
|
| Organism |
Homo sapiens |
| Characteristics |
cell type: monocytes
treated with: BD2 (5 micrograms/ml, Peprotech)
replicates: Y
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Cells lysed in RLT with Beta-2-mercaptoethanol, RNA was extracted using RNeasy-Micro kit (QIAGEN, Valencia, CA)
|
| Label |
biotin
|
| Label protocol |
GeneChip 2-cycle target labeling kit cDNA Synthesis Kit (Affymetrix )
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| |
|
| Hybridization protocol |
GeneChip cDNA Synthesis Kit (Affymetrix )
|
| Scan protocol |
Hewlett-Packard GeneArray Scanner G25Time: 0Time: 0A.
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| Description |
12_BD2-Y
|
| Data processing |
GCRMA (using gcrma package from R/Bioconductor)
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| |
|
| Submission date |
Nov 16, 2012 |
| Last update date |
Nov 17, 2012 |
| Contact name |
Mayte Suarez-Farinas |
| E-mail(s) |
[email protected]
|
| Organization name |
Mount SinaiSchool of Medicine
|
| Street address |
1425 Madison Ave, L2-70C, Box 1077,
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10075 |
| Country |
USA |
| |
|
| Platform ID |
GPL571 |
| Series (1) |
| GSE42305 |
TREM-1 is a novel therapeutic target in Psoriasis |
|
| Data table header descriptions |
| ID_REF |
|
| VALUE |
Normalized Expression values in log-2 scale |
| Data table |
| ID_REF |
VALUE |
| 1007_s_at |
2.741834934 |
| 1053_at |
7.369212402 |
| 117_at |
8.105926846 |
| 121_at |
5.745154066 |
| 1255_g_at |
2.158659319 |
| 1294_at |
3.228068956 |
| 1316_at |
2.158659319 |
| 1320_at |
2.158659319 |
| 1405_i_at |
11.10989971 |
| 1431_at |
2.158659319 |
| 1438_at |
2.158659319 |
| 1487_at |
8.609861826 |
| 1494_f_at |
2.158659319 |
| 1598_g_at |
2.813082343 |
| 160020_at |
8.47679351 |
| 1729_at |
8.127389414 |
| 177_at |
2.396129322 |
| 1773_at |
2.158659319 |
| 179_at |
2.158659319 |
| 1861_at |
4.933123582 |
Total number of rows: 22277
Table truncated, full table size 497 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GSM1038152_12_BD2-Y.CEL.gz |
1.9 Mb |
(ftp)(http) |
CEL |
| Processed data included within Sample table |
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