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Sample GSM106187 Query DataSets for GSM106187
Status Public on Sep 27, 2006
Title ALLREZ.P21
Sample type RNA
 
Source name bone marrow (freshly isolated mononuclear cells)
Organism Homo sapiens
Characteristics Age at relapse diagnosis [years]: 16.9
Sex: male
Immunophenotype: common
Time of relapse: very early
Site of relapse: isolated BM
ALL-REZ BFM risk group: high (S4)
Peripheral blast count at relapse diagnosis per microliter: NA
Minimal residual disease (after 2 induction cycles): NA
Genetic features: not found
S and G2/M phase cells [%]: 21.92
Frontline therapy: undefined
Extracted molecule total RNA
Label Biotin
 
Description first relapse acute lymphocytic leukemia
Data processing Probe level normalization: calibration and variance stabilization (Huber et al. PMID: 12169536). Probe-set summarization: median polish on the normalized data (Irrizary et al. PMID: 12582260).
 
Submission date Apr 21, 2006
Last update date Nov 14, 2018
Contact name Renate Kirschner-Schwabe
E-mail(s) [email protected]
Phone +4930450566088
Fax +4930450566946
URL http://www.charite.de/paedonko
Organization name Charité - Universitätsmedizin Berlin
Department Pediatric Oncology/Hematology
Lab Molecular Genetics
Street address Augustenburger Platz 1
City Berlin
ZIP/Postal code 12167
Country Germany
 
Platform ID GPL96
Series (1)
GSE4698 Molecular characterization of very early relapsed childhood ALL
Relations
Reanalyzed by GSE122505

Data table header descriptions
ID_REF
VALUE Normalized and summarized probeset expression value on additive arcsinh (log-like) scale

Data table
ID_REF VALUE
1007_s_at 3.13110312445825
1053_at 2.7062287562818
117_at 1.96462364043423
121_at 3.51283503072428
1255_g_at 0.832283799487516
1294_at 3.38227049033926
1316_at 1.86651953547834
1320_at 1.48425719038862
1405_i_at 1.49376964340295
1431_at 0.946425813448805
1438_at 2.35865656236200
1487_at 2.68213823408118
1494_f_at 2.22916449872978
1598_g_at 3.27751303373258
160020_at 3.05996837013599
1729_at 2.37791438903694
1773_at 1.92760766972185
177_at 1.81153289858905
179_at 3.89866265145156
1861_at 2.28354970766560

Total number of rows: 22283

Table truncated, full table size 608 Kbytes.




Supplementary file Size Download File type/resource
GSM106187.CEL.gz 3.3 Mb (ftp)(http) CEL
GSM106187.EXP.gz 491 b (ftp)(http) EXP

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